Gene Bphy_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1015 
Symbol 
ID6244644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1139409 
End bp1141337 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content61% 
IMG OID642592794 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001857250 
Protein GI186475780 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATT TCTTCCGTAA TCACCAACGT CTGATGATGT TCATGCTCAT CCTGGTCATC 
TTGCCGGGTT TGGGTTTCGT CGGTATCCAG GGTTTCCGTG GTTTCTTTGA CGAGAGCGCA
AACGTCGCGA GCGTCAATGG GCACAAGATC ACGCGTGGCG AGTTCGACAA CGCATGGCGC
CAGCAGATGG ACCGCGCGCG TCAGATGCTC GGCGCGCAGT TCGACGCGAA GATGTTCGAC
ACGCCGGAGC GGCGCAAAGA CATGCTCGAC GGTCTGATCC AGCAGCGTGT GCTGGCCGAC
GAAACGCAGC GCCTGCACCT GACGGTGTCC GACGACGCGC TGCGTCGCGC GTTGCTCGCG
GATCCCGTGA TCGGATCGTT GAAGAATCCG GACGGCTCGA TCGACGTGAA CAAATACAAA
GAACTCCTTG CGATGCAGGG CATCACGCCC GATCAGTACC AGGAGCAGGT GCGCTACAGC
ATGTCGATGC AACAGCTGCC GGCTGCCATC ACGCAGACGT CGTTCACGCC GAAGACGCTC
GCCCAGCATC TCACCGAACT CGCCGAGCAG CAGCGCGAAG TGCAGGGTCT CGCGTTCCGT
GCAAAGGAGT ACGAGTCGAA GGTGCAGCCG ACGGATGCGC AGATCCAAGC TTACTACGAT
GCCCATCGCG ACGACTTCGC GACGCCGGCA ACGGCGACTA TCCAGTATCT GGTGCTGTCG
CCTGCGACGC TCGCGGCAGC GGCGAATCCC AGCGACGCCG AGCTGAAGAA GTACTACGAC
GACAATATCG CGCATTTCCG CACGCCGGGC GAAGTGCGCG CCAGCCACAT CCTGATCGTG
GCGCCGAAGG ATGCAAGCTC AGCCGACAAG GAAAAGGCGA AACAGAAGGC GCGAGAAGTC
CTCGCGCAGG TGAAGGCGCA CCCTGACCAG TTCGCGCAAC TTGCGCAGCA GAATTCGCAG
GATCCGGGTT CGGCGTCGAA GGGCGGCGAT CTCGGCTACT TCAGCCCGGG CATGATCGCA
GGCGGCAAGG CGTTCGACGA CGCCGTGTTC AAGATGAAGA AGGACGAGGT CAGCGATCTG
ATCCAGTCGG ACTTTGGCTA TCACATTGTG AAGGTGACGG ACGTGAGGCC GTCGGTGACA
AAGCCGTTCG AGGAAGTGAA AGACTCGATC GCCAAAGATC TCAAGGCGCA ACTGGCGACC
AAGGCATTCG GCGACGATTC GGAAGGTTTC ACGTCGACGG TCTACGAACA GGCGAAGAGC
CTGCAACCGG CTGCCGACAA ATACAAGCTG CAGATCCAGA CCGCGACGGT CACGCCGCGC
GCCAACAGCG CGTTGCCGCC GGATAGCCCG CTGAACAATG CGAAATTCCT TGCTGCGGTT
TTCGCGAACG ATTCGGCCAA AGACCGCAAC AACACGCAGG CAATCGACGT GGGCAACAAC
ACGCTGATCG CAGCGCACGT GACCGACTAC AAGCCGGCCG CCGTACCCGC GCTGGCGGTC
GTCAGGGACG CCGTGCGTCA GAAGGTTGTC GCCCAGCGGG CAGCCGATCT CGCGCGAAAG
GAGGGCGAAG CGAAGTTGGC CGATCTGCGC AAGTCGAAGT CGACGGACGG CTTCTCGTCC
GCGCTAAAGG TATCGCGCAA CGACGCGCAG GGCGTACCGC CTGCTGCATT GGGTGCTATT
TACAAGGCCG ATGCGCAAAA ACTGCCTGCT TACGTCGGTG TCGATCTGGG CGCGGATGGT
TATGCGATCT ACCGCGTGAA TTCGATCGTG CCGCCTGCGC CGACGGATGC GCAGCGTCTG
ACGTCGGCGC AGCAGCAGAT CGCGTCGGTG AATGCGCAAG CTGAAGCGGA ATCCTATCTC
GATGCGTTGC GTGCCCGTTC GAAGGTAAAG ATTTACGGCT CGCTCGAGAA CCCGCAATCG
GGCGAATAA
 
Protein sequence
MLDFFRNHQR LMMFMLILVI LPGLGFVGIQ GFRGFFDESA NVASVNGHKI TRGEFDNAWR 
QQMDRARQML GAQFDAKMFD TPERRKDMLD GLIQQRVLAD ETQRLHLTVS DDALRRALLA
DPVIGSLKNP DGSIDVNKYK ELLAMQGITP DQYQEQVRYS MSMQQLPAAI TQTSFTPKTL
AQHLTELAEQ QREVQGLAFR AKEYESKVQP TDAQIQAYYD AHRDDFATPA TATIQYLVLS
PATLAAAANP SDAELKKYYD DNIAHFRTPG EVRASHILIV APKDASSADK EKAKQKAREV
LAQVKAHPDQ FAQLAQQNSQ DPGSASKGGD LGYFSPGMIA GGKAFDDAVF KMKKDEVSDL
IQSDFGYHIV KVTDVRPSVT KPFEEVKDSI AKDLKAQLAT KAFGDDSEGF TSTVYEQAKS
LQPAADKYKL QIQTATVTPR ANSALPPDSP LNNAKFLAAV FANDSAKDRN NTQAIDVGNN
TLIAAHVTDY KPAAVPALAV VRDAVRQKVV AQRAADLARK EGEAKLADLR KSKSTDGFSS
ALKVSRNDAQ GVPPAALGAI YKADAQKLPA YVGVDLGADG YAIYRVNSIV PPAPTDAQRL
TSAQQQIASV NAQAEAESYL DALRARSKVK IYGSLENPQS GE