Gene Bphy_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1001 
Symbol 
ID6242499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1122737 
End bp1123285 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID642592777 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001857236 
Protein GI186475766 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.987228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.67086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG TCGGCGATAA ACTCGAAGCT TTCACCGTCA CCGCTGCCAA GCCGGGTTTC 
AATCACCACG AAGAGAACGG CGTGTCGGCG TTCGAAGAAA TCACCGAATC GTCGTTCCCG
GGCAAGTGGA AAATCATCTA TTTCTACCCG AAGGACTTCA CGTTCGTTTG CCCCACGGAA
ATCGTCGAAT TCGGCAAGCT GGTGAAGGAC TTCGAAGAGC GCGATGCCGT TCTGCTCGGC
GGCAGCGTCG ACAACGAGTT CGTCAAGCTC GCCTGGCGCC GCGAGCACAA GGACCTGAAC
AAACTGAACC ACTACGCCTT TGGCGACGTG AAGGGCGAAC TGATCGACCA GCTCGGCGTG
CGCGACAAGG AAGCAGGCGT CGCACTGCGC GCGACGTTCA TTGTCGATCC GGACAACACG
ATCCAGCACG TGTCGGTGAA TAACCTGAAC GTCGGCCGTA ATCCGGAAGA GGTCCTGCGC
ATTCTGGACG GCCTGCAGAC GGACGAGCTG TGCCCGTGCA ACCGCGCAGT CGGCGGTGCA
ACGCTGTAA
 
Protein sequence
MKTVGDKLEA FTVTAAKPGF NHHEENGVSA FEEITESSFP GKWKIIYFYP KDFTFVCPTE 
IVEFGKLVKD FEERDAVLLG GSVDNEFVKL AWRREHKDLN KLNHYAFGDV KGELIDQLGV
RDKEAGVALR ATFIVDPDNT IQHVSVNNLN VGRNPEEVLR ILDGLQTDEL CPCNRAVGGA
TL