Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0999 |
Symbol | ispF |
ID | 6242497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1121567 |
End bp | 1122046 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642592775 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001857234 |
Protein GI | 186475764 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTGA GAATCGGACA AGGCTATGAC GTTCACGCAC TGGTGCCGGG ACGACCGCTC ATCATCGGGG GCGTGACGAT TCCCTACGAG CGCGGACTGC TCGGCCATTC GGATGCCGAC GTGCTGCTGC ACGCGATTAC CGACGCATTG TTCGGCGCCG CCGCGCTCGG CGACATCGGC CGTCATTTCC CGGATACCGC GACGGAATTC AAAGGCGCGA ACAGCCGCGT ACTGCTGCGC GAATGCGCGG CGCGCATCGC AAGGGCGGGC TTCACGATCC AGAACGTCGA CAGCACCGTG ATCGCGCAGG CGCCGAAGCT CGCGCCGCAT ATCGACGGGA TGCGCGCGAA TATCGCCGAA GACCTCAACC TGCCCATCGA CCGCGTCAAC GTAAAGGCGA AGACGAACGA GAAGCTCGGC TATCTCGGAC GAGGCGAGGG CATCGAAGCG CAGGCGGCCG CGCTGCTGGT GCGCGTCTGA
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Protein sequence | MDLRIGQGYD VHALVPGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG RHFPDTATEF KGANSRVLLR ECAARIARAG FTIQNVDSTV IAQAPKLAPH IDGMRANIAE DLNLPIDRVN VKAKTNEKLG YLGRGEGIEA QAAALLVRV
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