Gene Bphy_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0999 
SymbolispF 
ID6242497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1121567 
End bp1122046 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID642592775 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001857234 
Protein GI186475764 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGA GAATCGGACA AGGCTATGAC GTTCACGCAC TGGTGCCGGG ACGACCGCTC 
ATCATCGGGG GCGTGACGAT TCCCTACGAG CGCGGACTGC TCGGCCATTC GGATGCCGAC
GTGCTGCTGC ACGCGATTAC CGACGCATTG TTCGGCGCCG CCGCGCTCGG CGACATCGGC
CGTCATTTCC CGGATACCGC GACGGAATTC AAAGGCGCGA ACAGCCGCGT ACTGCTGCGC
GAATGCGCGG CGCGCATCGC AAGGGCGGGC TTCACGATCC AGAACGTCGA CAGCACCGTG
ATCGCGCAGG CGCCGAAGCT CGCGCCGCAT ATCGACGGGA TGCGCGCGAA TATCGCCGAA
GACCTCAACC TGCCCATCGA CCGCGTCAAC GTAAAGGCGA AGACGAACGA GAAGCTCGGC
TATCTCGGAC GAGGCGAGGG CATCGAAGCG CAGGCGGCCG CGCTGCTGGT GCGCGTCTGA
 
Protein sequence
MDLRIGQGYD VHALVPGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG 
RHFPDTATEF KGANSRVLLR ECAARIARAG FTIQNVDSTV IAQAPKLAPH IDGMRANIAE
DLNLPIDRVN VKAKTNEKLG YLGRGEGIEA QAAALLVRV