| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0995 |
|---|
| Symbol | |
|---|
| ID | 6242493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1114435 |
|---|
| End bp | 1115694 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642592771 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_001857230 |
|---|
| Protein GI | 186475760 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.717305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGG TCGCTGACAA AGCGCTGTCC GCACAAACGT CCCCGCCTTC CGCCGATTCC
GCCCGCGCTT CGTCTCCCGC TTCGCTTCCC TGGGTCACGC GTCTCGTGTC GATGGACACG
GTCAGCCGCA ATCCGAATCT CGGACTGATT GAAACAGTGC GCGATTCGCT GCGCGAGCGC
GGTATCGAAG CGACGCTCAC GCACGACGAA AGCGGCAAGT GGGCGAACCT GTTCGCGACC
ATTCCGGCGC ATGACGGCGA GACCCAGGGC GGGATCGTGC TATCGGGCCA TACGGACGTC
GTGCCCGTCG ACGGCCAGAA GTGGGACAGC GATCCCTTCA AGCCGGAAGT GCGCGGCGAC
AAGCTTTATG GGCGTGGCAC GTGCGACATG AAAGGCTTTA TCGGCGCAGC ATTGACGCTC
GTGCCGCGGA TGCAGCAGAC GAAGCTCGCC AAGCCGATCC ACCTCGCGTT CTCGTTCGAC
GAAGAAGTAG GCTGCGTAGG CGCGCCGCTG ATGATCGCCG ATCTGATGAA ACGCGGCATC
AAGCCGGACG GCTGCATTGT CGGCGAGCCG ACCAGCATGC GCCCCATCAT CGCGCACAAG
GGCATCAATG CGTACCAGTG CTGCGTGCGC GGCTTCGCGG CGCATTCGTC GCTGACGCCG
AAGGGCTTGA ACGCGATCGA ATATGCGGCG CGCCTGATCT GCTTCATCCG CGACATGGCC
GACCAGTTCC GCGATCAAGG TCCGTTCGAT CAACTCTACG ACGTCCCGTT TACGACGGCG
CAGACCAGCA CGATCAAGGG CGGCAACGCG ATCAACACGG TCCCGGCCGA ATGCAGCTTC
GAGTTCGAGT TCCGCAATCT GCCCACGCTG GACCCCGAGC CGATCTTCGC GCGCATCGAT
CAATACGCGC GCGAAACCCT GCTGCCCAAA ATGAAGCGCG AGCACGAAGC GGCCGCGATC
GAGTTCACGA AAATCGCTGC GGCGCCTGGG CTCGACGCAA CGGAGCAGGC GGCCATCACG
CAACTGGTGC GCGCGCTCAC CGCCGATCAG GACAAGCGCA AGGTCGCGTA CGGCACGGAA
GCGGGCCTGT TCTCGCTGGC GGGCATTCCG AGCATCGTAT GCGGTCCCGG CGACATCCAG
CAGGCGCACA AGGCAAATGA GTTCGTCACG CTGGACCAAC TCGCGCAGTG CGAACGGTTC
CTCGAGAAGT TCATTCACAG CATGTCGGTC GATGCGGCGC ACATTGACCC AAGCAGTTGA
|
|---|
| Protein sequence | MSLVADKALS AQTSPPSADS ARASSPASLP WVTRLVSMDT VSRNPNLGLI ETVRDSLRER
GIEATLTHDE SGKWANLFAT IPAHDGETQG GIVLSGHTDV VPVDGQKWDS DPFKPEVRGD
KLYGRGTCDM KGFIGAALTL VPRMQQTKLA KPIHLAFSFD EEVGCVGAPL MIADLMKRGI
KPDGCIVGEP TSMRPIIAHK GINAYQCCVR GFAAHSSLTP KGLNAIEYAA RLICFIRDMA
DQFRDQGPFD QLYDVPFTTA QTSTIKGGNA INTVPAECSF EFEFRNLPTL DPEPIFARID
QYARETLLPK MKREHEAAAI EFTKIAAAPG LDATEQAAIT QLVRALTADQ DKRKVAYGTE
AGLFSLAGIP SIVCGPGDIQ QAHKANEFVT LDQLAQCERF LEKFIHSMSV DAAHIDPSS
|
|---|
| |