Gene Bphy_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0971 
Symbol 
ID6242469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1085656 
End bp1086396 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID642592747 
Productacetyacetyl-CoA reductase 
Protein accessionYP_001857206 
Protein GI186475736 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.438237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC GAATTGCGTA CGTAACAGGC GGCATGGGTG GCATCGGCAC GAGCATTTGC 
CAGCGTCTGC ATAAAGATGG CTTCAAGGTG ATCGCGGGCT GCGGCCCCAA CTCGCCGCGC
CGCGTGAAGT GGCTCGAAGA TCAGAAGGCG CTTGGCTTCG ACTTTGTTGC TTCCGAAGGC
AACGTGGGCG ACTGGGAGTC GACCAAGGCC GCGTTCGACA AGGTGAAAGC AGAAGTCGGC
GAAATCGATG TGCTGGTGAA CAATGCGGGC ATCACGCGCG ACGTCGTGTT CCGCAAGATG
ACGCATGAAG ACTGGACGGC CGTGATCGAC ACGAACCTGA CCAGCCTCTT CAACGTGACG
AAGCAGGTGA TCGACGGCAT GGTCGAGCGT GGCTGGGGCC GCGTGATCAA CATTTCGTCG
GTAAATGGCC AGAAAGGTCA GTTCGGTCAA ACGAACTACT CGACCGCGAA GGCGGGCATT
CACGGTTTCA CGATGGCGCT CGCGCAGGAA GTGGCCACCA AGGGCGTGAC GGTCAACACC
GTTTCGCCGG GCTACATCGG CACGGACATG GTGAAATCGA TTCGCGCCGA CGTGCTGGAA
AAAATCGTCG CGACGATTCC GGTGCGCCGT CTCGGCACGC CGGATGAAAT CGGGTCGATC
GTCGCATGGC TGGCATCGGA CGAGTCGGGC TTCTCGACGG GGGCTGACTT CTCTCTGAAC
GGCGGCCTGC ATATGGGCTG A
 
Protein sequence
MSQRIAYVTG GMGGIGTSIC QRLHKDGFKV IAGCGPNSPR RVKWLEDQKA LGFDFVASEG 
NVGDWESTKA AFDKVKAEVG EIDVLVNNAG ITRDVVFRKM THEDWTAVID TNLTSLFNVT
KQVIDGMVER GWGRVINISS VNGQKGQFGQ TNYSTAKAGI HGFTMALAQE VATKGVTVNT
VSPGYIGTDM VKSIRADVLE KIVATIPVRR LGTPDEIGSI VAWLASDESG FSTGADFSLN
GGLHMG