| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0965 |
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| Symbol | rumA |
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| ID | 6242463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1077109 |
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| End bp | 1078530 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592741 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_001857200 |
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| Protein GI | 186475730 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAA CTGTCCCCCA CATTGGTAAA ACCCGCTCGC CCAGAAAAGG CAAGCAGGCG
CGCGAAGACG CCGCCGGCCC GTTCAAGGCG CCCGAACTCG ACATCGAGTC GCTCGACATG
GAAGCGCGCG GCGTCGGCCG CACCGTCACG GAAGACGGCT CGCCCGGCAA GGTCATCTTT
GTCGAAGGCG CGCTGCCCGG CGAACGCGTC ACGTACTCGA GCTACCGCAA GAAGCCCAGT
TTCGAACAGG CGCAGGTCGT CGATATTCTT AAAGAGAGCG TGATCCGTAC CCGCCCGCAG
TGCAAGTTTT TTGGCACCTG CGGGGGCTGT TCGATGCAGC ATCTCGACGT GCGTGCACAA
ATCGCTGTCA AGGGTCGCGT GCTCGAAGAC AATCTGATGC ACCTGGCCAG GCTGCGTCCG
GAAACCGTGT TCCGGCCGAT CCACGGTCCG TCCTGGGGCT ATCGCTATCG CGCGCGCCTG
ACGGTGCGCC ATGTCGCGAA AAAGGGCGGC GTGCTGGTCG GTTTTCACGA GCGCAAGAGC
AGTTACGTCG CCGACATGAC GAGTTGCGAA GTGCTGCCGC CGCATGTTTC CGACATGCTC
GTGCCGCTGC GCCACATGGT CGAAGCGCTG TCGATTCGCG ATCGCATGCC GCAGATCGAA
CTCGCGGTCG GTGCATCGGT GACGGCGCTC GTGCTGCGCA TCCTCGAGCC GATCAACGCC
GCCGACGAAC AGCTGCTGCG CGACTTTGCG GATCTGCACA ACGTCCAGTT CTGGCTGCAG
CCGAAGGGCC CGGATTCCGT CTATCCGTTC TATCCGCTCG ATCGCCAGCT CGATTACACG
CTACCCGAGT TCGGCATCCG CATGCCGTTC CGCCCGACGG ATTTCACGCA GGTCAATCAC
CAGATCAACC GCGTGCTGGT CGGCCGGGCG CTGCGTCTGC TCGCGCCTGC GAAGACCGAC
CGTGTGCTCG ATCTGTTCTG CGGTATCGGC AACTTCACGC TGCCGCTCGC GCGGATTTCC
CGCGAAGTGG TGGGCATCGA AGGCAGCGAG GTGCTGACCT CGCGCGCACT CGACAACGCG
AAGGAAAACG GCGTAGACAG CCACACGTCG TTTGCGTGCC GCAACCTGTT CGAAGTCACG
GCCGACGACA TCCGCGCGCT AGGCCACTTC GACAAGTATC TGATCGATCC GCCGCGCGAA
GGCGCGCTCG CCGTGTCGAA GGCGCTCGCC GACATCGCAC AGAGCGGCGA AGGGCGGCTG
CCGACACGCA TCGTCTACGT GTCGTGCAAT CCCGCGACGC TCGCGCGCGA CGCGGGGCTG
CTGGTGCACG AGGCCGGTTA TCGCTTGAAG GGCGCGGGTG TGGTGAACAT GTTCCCGCAC
ACGTCGCACG TCGAATCCAT CGCACTGTTC GAACGGGACT GA
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| Protein sequence | MSETVPHIGK TRSPRKGKQA REDAAGPFKA PELDIESLDM EARGVGRTVT EDGSPGKVIF
VEGALPGERV TYSSYRKKPS FEQAQVVDIL KESVIRTRPQ CKFFGTCGGC SMQHLDVRAQ
IAVKGRVLED NLMHLARLRP ETVFRPIHGP SWGYRYRARL TVRHVAKKGG VLVGFHERKS
SYVADMTSCE VLPPHVSDML VPLRHMVEAL SIRDRMPQIE LAVGASVTAL VLRILEPINA
ADEQLLRDFA DLHNVQFWLQ PKGPDSVYPF YPLDRQLDYT LPEFGIRMPF RPTDFTQVNH
QINRVLVGRA LRLLAPAKTD RVLDLFCGIG NFTLPLARIS REVVGIEGSE VLTSRALDNA
KENGVDSHTS FACRNLFEVT ADDIRALGHF DKYLIDPPRE GALAVSKALA DIAQSGEGRL
PTRIVYVSCN PATLARDAGL LVHEAGYRLK GAGVVNMFPH TSHVESIALF ERD
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