Gene Bphy_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0963 
Symbol 
ID6242461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1075247 
End bp1076023 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID642592739 
Product3'-5' exonuclease 
Protein accessionYP_001857198 
Protein GI186475728 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.188043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCA TTCTGGTTTT CGACATCGAG ACGATTCCCG ATGTCGCTGG CATTCGCCGG 
CTTGAAAGTC TTCCCGCAGC GATGTCCGAC GAAGAAGTGG CCGAGCACGC GTTCGCGGCT
CGGCGCGAGA AGACGGGCAG CGATTTTCTG CCGCATCACT TGCAGCGCGT CGCGGCGATT
TCCTGTGTGT TCCGCGACAA CAACGGCTTT CGTGTGCGAT CGCTCGGCAC GCCCAGTGAC
GGCGAGGCTG CGCTCGTGCA GTCGTTTTAC CGGACTATCG AGAAGTACAC GCCGCAGCTG
GTGTCGTGGA ACGGCGGCGG TTTCGATCTG CCCGTGCTGC ATTACCGTGC GCTCGTCAAC
GGCATTCGCG CGAACCGATA CTGGGATCTC GGCGAGGACG ATCGCGACTT CAAGTGGAAT
AACTACATCA GCAGGTATCA CTCGCGTCAT ACGGACTTGA TGGATGTGCT CGCGATGTAT
CAGGCGCGGG CGAATGCACC GCTCGATGCG CTTGCCAGGC TATGTGGTTT CCCGGGCAAG
CTCGGGATGG ATGGCGGGCA GGTCTGGCAT GCGTTTCAGG CCGGCCGTAT CGACGAGATT
CGCAACTACT GCGAGACGGA TGTCGTCAAT ACCTACCTGC TGTATTGCAG GTTTCAGTTG
ATGAGGGGCG GGTTCTCGCC GGAAGAGTAC GCGGATGAGA TCGCGCTGGT GAAGAACGCC
TTGGCGCAGG AAGCAGCGCC TCATTGGGGT GAGTATCTGT CTGCGTTCGA TAACTGA
 
Protein sequence
MTPILVFDIE TIPDVAGIRR LESLPAAMSD EEVAEHAFAA RREKTGSDFL PHHLQRVAAI 
SCVFRDNNGF RVRSLGTPSD GEAALVQSFY RTIEKYTPQL VSWNGGGFDL PVLHYRALVN
GIRANRYWDL GEDDRDFKWN NYISRYHSRH TDLMDVLAMY QARANAPLDA LARLCGFPGK
LGMDGGQVWH AFQAGRIDEI RNYCETDVVN TYLLYCRFQL MRGGFSPEEY ADEIALVKNA
LAQEAAPHWG EYLSAFDN