| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0945 |
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| Symbol | |
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| ID | 6242443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1055014 |
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| End bp | 1056375 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642592721 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001857180 |
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| Protein GI | 186475710 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACG ATGTGCGGAA AATCGCCGGG CTCGCGTGGC CCGTGCTGAT CGGCCAGCTG
GCGATCATCG CGTTCGGCGT GATCGATACA GCGATGGTCG GCCGCTTCTC GGCGACCGAC
CTTGCAGCCC TCGGCCTCGG TTCGTCGATC TATATCTCGG TGTACATCGG CCTGACGGGC
ATTCTGACCG CGCTGCAACC GATTGCCGGC CAACTCTACG GCGCTGCGCG CTACGAGGAG
ATCGGCGAGG AGGTGCGTCA GGCGCTGTGG CTCGCGCTGG CGCTCGCCGC GCTCGGCTTT
CTGGTTCTCT ACTTCCCCCA CCCGCTGCTG CAGCTGGCGC GGGCGCCCGA GGCGCTGCGC
GAGCGCACTG TGTCCTATCT GCAGATTCTC GCGTTCGGGC TGCCAGCGAG TCTCGCATTT
CGCGTCTATA GCTCGCTGAC GAATGCCGTC GGCCAGCCGC GGCTCGTGAT GATCCTGCAG
ATCGGCGCGC TGATGCTCAA GGTGCCGCTC AATCTGCTGC TGATTTTCGG CAAGCTCGGC
ATGCCGGCGC TCGGTGGGCC GGGGGCGGCG CTCGCCAGCA TTCTGATCAA CTGGACGCTG
GCCGTCGTCG GCATGGTCGT GCTGACGAAG CTGGACGTGT TCCAGCCGTT CGCGATCTTC
CGGCATTTCT GCTGGCCCGT CTGGCGGCGT CAGGCGGCCC AGCTGAAGCT CGGCGTACCG
ATGGGGCTGT CGTATCTGAT CGAAGTGACG TCGTATACCT TCATGGCGCT CTTCATCGCT
CGCTTCGGCA CGACCACGCT GGCCGGTCAT CAGATCGCGG GCAACATCGG CGCGGTGCTC
TACATGACGC CGCTGTCGAT CGGCATCGCT ACTTCTACGC TCGTCGCTCA GGCGCTCGGT
GCACATCGCT ACGAAGCGGC GCGCACGCTG GCGCGGCACG GCATCGCGAT GGCCGTGGCG
ATTGCGTGCG GGTATGGCGT GATCGTGCTC GCGCTGCGGC CCGTCATCAT CGCGGGCTAC
ACGCCGAATG CGCAGGTCCT GCAGGCGGCG ATGCCGCTCG TGTTGATCGT CGCGTTCTAC
CATCTGTGCG ACGCGTTGCA GATCACGTCG GCGTTCGTGC TGCGGGCGTA TCGGGTGGCC
GTCGTGCCGA CCCTGATCTA TGCCATTGCA CTGTGGGGCG TGGGACTCGG CGGCGGCTAT
GCGCTCGGGT TCGATCTCGG CGGCTGGGTG CCGGAGTCGC TCACCGGCGC GCGCGGATTC
TGGCTCGCGA ATACTGCGAG CTTGCTGATT GCGGGTGTTG GGCTTGCCTT GTATTTGCGC
TCGATCAGCA CGCGGATAGG CGCTGGGCGG CACAGCGGGT AG
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| Protein sequence | MFDDVRKIAG LAWPVLIGQL AIIAFGVIDT AMVGRFSATD LAALGLGSSI YISVYIGLTG
ILTALQPIAG QLYGAARYEE IGEEVRQALW LALALAALGF LVLYFPHPLL QLARAPEALR
ERTVSYLQIL AFGLPASLAF RVYSSLTNAV GQPRLVMILQ IGALMLKVPL NLLLIFGKLG
MPALGGPGAA LASILINWTL AVVGMVVLTK LDVFQPFAIF RHFCWPVWRR QAAQLKLGVP
MGLSYLIEVT SYTFMALFIA RFGTTTLAGH QIAGNIGAVL YMTPLSIGIA TSTLVAQALG
AHRYEAARTL ARHGIAMAVA IACGYGVIVL ALRPVIIAGY TPNAQVLQAA MPLVLIVAFY
HLCDALQITS AFVLRAYRVA VVPTLIYAIA LWGVGLGGGY ALGFDLGGWV PESLTGARGF
WLANTASLLI AGVGLALYLR SISTRIGAGR HSG
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