Gene Bphy_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0926 
Symbol 
ID6242424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1028153 
End bp1029304 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content63% 
IMG OID642592702 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001857161 
Protein GI186475691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0698144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.63376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT CATCCGTTCC GTTTTTGCCG TTCGTGCGTC CCGAGATCGA TGAAGAAACG 
ATCAGCGGTG TAGTCGACGT GCTCCGCTCC GGCTGGATTA CGACGGGCCC GCAGAATCAG
GCGTTTGAAA AGGCATTGTC GGCGTACTGC GGCGGCCGCC CGGTGCGCAC GTTCAATTCG
GGCACGGCGA CGCTGGAAAT CGGTCTGCGC ATCGCGGGCG TCGGCGCTGG CGACGAAGTC
ATCACGACGC CCGCGTCGTG GGTCGCGACC AGCAACGTGA TCCTCGCAGT GGGCGCAACA
CCCGTGTTCG TCGATATCGA CCCGGTCACG CGCAACATCG ATCTGGATCT GATGGAAAAG
GCGATCACGC CGCGGACCAA AGCGATCATC CCCGTGTTCC TGTCCGGCCT GCCCGTCGAC
ATGGACCGGC TCTACGCGAT CGCCCGCGCG CACAAGCTGC GCGTGATCGA AGACGCCGCG
CAGGCCTTCG GCGCAACGTG GAACGGCGAG CGCATCGGCA AGCTGGGCGA CCTCGTGTCG
TTCAGCTTTC ACGCGAACAA GAACCTGACC TCGATCGAAG GCGGCGCACT GGTGCTGAAC
AACGAAGAGG AAGCCGTCCT GGCGCAGAAG TACCGGCTGC AGGGCATCAC GCGCACGGGC
TTCGACGGCA TGGATTGCGA CCTGCTCGGC GGCAAGTACA ACCTGACGGA CGTCGCAGCA
CGTGTCGGCC TGGGTCAGTT ACAGCATATC GAGCGCTTTC GCACGCAGCG CCACAAGCTG
GCGCGCGCAT ACTTCGCTGG GTTCGACGGC GGCGCGGCCG TCCGGCTCGG CATGGGCCTG
CCGCTGGCGG ACTTCGAAAA CACCAACTGG CATATGTTCC TCGTTACGCT GCCGCTCGCG
CGTCTGTCGA TCACGCGCGC CGGCTTCATG GAGCAGATGA AGGAGCGCGG CATCGGCACG
GGCACGCACT ATCCGGCCAT CCATTTGTTC TCGCTGTATC GCGCAATGGG GTACAAGGAA
GGCATGTATC CGCATGCGGA GCACTACGGC GCAACCACAC TTACACTGCC GCTCTTCACG
CTGATGAATG AAGGCGATGT CGAGCGCGTG TGCCGCGCCG TCAACGAGAT TTGCGAACAA
TACGGTCAAT AA
 
Protein sequence
MTQSSVPFLP FVRPEIDEET ISGVVDVLRS GWITTGPQNQ AFEKALSAYC GGRPVRTFNS 
GTATLEIGLR IAGVGAGDEV ITTPASWVAT SNVILAVGAT PVFVDIDPVT RNIDLDLMEK
AITPRTKAII PVFLSGLPVD MDRLYAIARA HKLRVIEDAA QAFGATWNGE RIGKLGDLVS
FSFHANKNLT SIEGGALVLN NEEEAVLAQK YRLQGITRTG FDGMDCDLLG GKYNLTDVAA
RVGLGQLQHI ERFRTQRHKL ARAYFAGFDG GAAVRLGMGL PLADFENTNW HMFLVTLPLA
RLSITRAGFM EQMKERGIGT GTHYPAIHLF SLYRAMGYKE GMYPHAEHYG ATTLTLPLFT
LMNEGDVERV CRAVNEICEQ YGQ