Gene Bphy_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0919 
Symbol 
ID6242417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1019928 
End bp1021076 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID642592695 
ProductNLP/P60 protein 
Protein accessionYP_001857154 
Protein GI186475684 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0475791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.21921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCC TCGCGCTGTC ACTATCGGTC GTCGCCCTGC TCGCCGCGTG CTCCGGCGCG 
CCGCAAAAGA CCGTGCGCGG CTCGGGCGGA TCGTATGCGT CCTCGGGTGA CGCGTACCGC
ACCACGCCCC CCGGCTTTCC GCGTTTCGTC GATCACAGCA TCGGCCGCGA AGAAATCTCC
ATTCAGGCGA TGAGCCTCGT CGGCGTGCCC TATCGCTGGG GCGGCAACAC GCCTGACAGC
GGCTTCGACT GCAGCGGGCT CGTGCATTAC GTCGTGCAGC GCGCTGCTTC CGTGAACCTG
CCGCGCACGA CGGCCGACAT GAGTTCGCGC GGCGAATCGA TCGATCCCGA CGAAGTCGCG
CCGGGCGACC TGATTTTCTT CAACACAACA GGACGGCCGC ATTCGCATGT CGGGATCTAC
GTCGGCAAGT TGCGCTTCGT GAACGCACCG TCGACGGGCG GCACCGTGCG GCTCGACTAT
CTGACCAACC CGTATTGGGC GAAGCGTTTC GATGGCATCC GCCGGGTGGC GCCCGCGCTA
AGCAAGCCGA CGCCTGCGCC GTTCGATGCG CCGAGCTATC AGGCTGCCGC GCCCGCGCCG
TGGGCACCCG CGGCTGCGCC TGCTGTTGCG GCCGTGGATA CCTCGCGTCA TGCCGCAGCT
ACGGAAGTGC CCGCCGTCGT GCATGGCACG TCTCGCGGCG TCGCCGGCAC GTACGCCTCG
CAAGCTCGCA CGCAGGCCGC ATCCAGCGCG AATACAGCGG CTGTGACTGC GGCCGCGCCC
GCCGAGGCCT CCGCCGATCA GTTCGAACCC CCTCCACCCG GAATGAGCGC GGCGCGGCTG
CAGGCGCGCG CAGCAGGCGC GGTGTCGCCG GGCATGGCTG CTCCGGTGAA TTCGCCTGCT
ACCGACGCGA CGATGCAACG CGCCGACCGT ACCGCCGCCC CGTCCGATGC CATCGACGCG
GCCGCCGATG CGTACGAGCC GCCGCCGCCC GCCGCCGTGG CCAACCGGCA GGCGCTTCAG
GCGCGCCAAG CACAATCGTA CGGTGATCAG GGCGGCGTGC AGATCATGCG GGCGTCGACG
GCTTCGCGGC CGGTTCCCGC GCCGACGCGG ACCAACGACG ATCCGATTGC GGGCTTCGCG
AACGACTGA
 
Protein sequence
MLRLALSLSV VALLAACSGA PQKTVRGSGG SYASSGDAYR TTPPGFPRFV DHSIGREEIS 
IQAMSLVGVP YRWGGNTPDS GFDCSGLVHY VVQRAASVNL PRTTADMSSR GESIDPDEVA
PGDLIFFNTT GRPHSHVGIY VGKLRFVNAP STGGTVRLDY LTNPYWAKRF DGIRRVAPAL
SKPTPAPFDA PSYQAAAPAP WAPAAAPAVA AVDTSRHAAA TEVPAVVHGT SRGVAGTYAS
QARTQAASSA NTAAVTAAAP AEASADQFEP PPPGMSAARL QARAAGAVSP GMAAPVNSPA
TDATMQRADR TAAPSDAIDA AADAYEPPPP AAVANRQALQ ARQAQSYGDQ GGVQIMRAST
ASRPVPAPTR TNDDPIAGFA ND