| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0918 |
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| Symbol | |
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| ID | 6242416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1018980 |
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| End bp | 1019786 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592694 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001857153 |
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| Protein GI | 186475683 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.110514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.280758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG GTCTCAAAGA CAAGGTGGTT CTGATAACGG GCGGCAGCAA GGGCATCGGA
CTGGCGTGCG CGCGGGCTTT CGCGATGGAA GGCGCGAAGG TCGCGATCGT CTCGCGTGAT
CCCGCCAATC TCGCTCGCGC CCGCGAGCAA TTGTCGAGCG AAGGCTTGCA TGTGCATCTG
ACGCGCGCGG ATCTACACGA GCCGCATAGC GCCGCAGACG TCGTCGAGGA AGCGACGGGC
GCCGTCGGCC CGATCGACAT CCTCATCAAC AGCGCGGGCG CCGCGCGTCG CTACGATCCC
GAATCGCTCG ACGCGGCCGC GTTCAAGGCG ACGATGGAAG CCAAGTACTT TCCGTATATC
TATCCGCAAC AGGAGGTGCT GAAGCGTATG GCCGAGCGCG TCAAATCCGG CGCCGCAAAG
GAGCCGGGCA CCATTGTCAA CATCATCGGC ATGGGTGGGA AGATGGCGAG CGACATTCAC
ATCGCAGGCG GTGCCGCCAA CGCGGCACTG ATGCTCGCGA CCGTCGGCCT TGCGCACTAT
TACGCGCGCT ACGGCATTCG CATCAACGCG ATCAATCCCG GCGCGACGCT GACGGATCGC
GTCGAAGAAG CGCTGAAACT CGAAGCGTCG CGCGAAGGCA TCGAGCCCGC CGAAGCGCTA
ACGCGTGGGG AAGCACGCGT GCCGCTCGGA CGTTTCGCGA AACCGGAGGA AATCGCGGAC
GTCGCGCTTT TTCTGGCGAG TCGCCGCGCG AGCTACGTAA CGGGCGCGAT CGTCCCGATG
GATGGAGGCA GCACGCCGCT GATCTGA
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| Protein sequence | MDLGLKDKVV LITGGSKGIG LACARAFAME GAKVAIVSRD PANLARAREQ LSSEGLHVHL
TRADLHEPHS AADVVEEATG AVGPIDILIN SAGAARRYDP ESLDAAAFKA TMEAKYFPYI
YPQQEVLKRM AERVKSGAAK EPGTIVNIIG MGGKMASDIH IAGGAANAAL MLATVGLAHY
YARYGIRINA INPGATLTDR VEEALKLEAS REGIEPAEAL TRGEARVPLG RFAKPEEIAD
VALFLASRRA SYVTGAIVPM DGGSTPLI
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