| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0891 |
|---|
| Symbol | |
|---|
| ID | 6242389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 997972 |
|---|
| End bp | 998787 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642592665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001857126 |
|---|
| Protein GI | 186475656 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0879726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGAAC TGCCGACGCC TACCCTGCCC TTCGCATCGA TCCTTGAGCC GCGTCGTCGC
CTGCCGCGCG CGGAAGAAAC GGTCACCGCC CAGCATCGTC TGCAAGTCTC GTGGGCGCGT
ACCGACGAGG AGCTTCGTGA AGCGCAGCGT CTGCGCTACC GGGTCTTCGC CGAGGAAATG
GGCGCGCGCC TGTCCGGTCC CGCCGGCCTC GACGTCGATT CGTTCGATGC TTACTGCGAT
CACCTGATCG TCCGCGACCT CGACACGCTG AAGGTTGTCG GCACGTATCG CGTGCTGCCG
CCGCACCAGG CGGCGCGCAT TGGCCGGCTG TATGCCGAGG GCGAGTTCGA CGTCTCCCGC
CTTACGCATC TGCGCTCGAA GATGGTCGAG GTGGGCCGCT CGTGCGTGCA CCCCGACTAT
CGCAGCGGCT CGGTGATCAT GTCGCTGTGG GCCGGTCTTG GGTCGTACAT GCAGCACAAC
GGCTACGAGA CGATGCTTGG CTGCGCGAGC GTCGCGATGG CGGACGGCGG CCACTATGCG
GCGAACCTGT ACGCCTCCTT GCAGGACGAC ACGCTGACGA CGCCGGAGTA CCGCGCGTTT
CCGCATACGG CGCTGCCCGT CGATGAATTG CAGACGGGGG CGAAGGTGGC GCCTCCGCCG
CTGATCAAGG GTTATCTGCG CCTCGGCGCG AAAATTTGCG GCGCGCCTGC ATGGGATCCC
GATTTCAATA CCGCCGACTT TTTGACGCTG TTCCGGTTGT CGGAGATCAA TGCGCGGTAT
GCGCGGCATT TTCTTGGGGA CGCACTGGGG CGTTGA
|
|---|
| Protein sequence | MRELPTPTLP FASILEPRRR LPRAEETVTA QHRLQVSWAR TDEELREAQR LRYRVFAEEM
GARLSGPAGL DVDSFDAYCD HLIVRDLDTL KVVGTYRVLP PHQAARIGRL YAEGEFDVSR
LTHLRSKMVE VGRSCVHPDY RSGSVIMSLW AGLGSYMQHN GYETMLGCAS VAMADGGHYA
ANLYASLQDD TLTTPEYRAF PHTALPVDEL QTGAKVAPPP LIKGYLRLGA KICGAPAWDP
DFNTADFLTL FRLSEINARY ARHFLGDALG R
|
|---|
| |