Gene Bphy_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0880 
Symbol 
ID6242378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp984031 
End bp984873 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID642592654 
Productdihydropteroate synthase 
Protein accessionYP_001857115 
Protein GI186475645 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.646734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0771022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGCG GCCGGTTTAC GTTCACGTTC GAACGTCCGC TCGTGATGGG CATCTTGAAC 
GTCACGCCCG ACTCCTTTTC CGATGGCGGC CTGTACGCGG ATCCGGGCAA GGCGCGGCTG
CAGGCGGAGA GGCTATTGGC GGAAGGCGCC GATATCATCG ATATCGGCGG CGAGTCGACC
CGGCCAGGGG CGCCACCTGT GCCCTTGGCC GAGGAACTGG AGCGGGTGAT TCCGCTCGTC
AAGGAACTGA GCGACGCAGG CATTCCGGTG TCCGTCGACA CGTACAAGCC CGAAGTGATG
CGTCATGCGC TGGCGGCGGG CGCTGATCTG ATTAATGATA TTTGGGGCTT CAGGATGCCC
GGCGCGATCG ATGCGGTGCG CGACAGCCAA TGCGGCTTGT GCGTGATGCA CATGCTGGGC
GAACCGCAGA CGATGCAGGT CGGCGAGCCG GTCTACGGGG ACGTCGTTGT CGACATACGC
GCCTTTCTGG AAGAACGTGT CGCTACGATG ATAAAGGCCG GTGTTGCGAA AAATCGCGTC
AGCGTCGATC CGGGCTTCGG ATTTGGCAAG ACGGTCGAGC ATAATTACGC GCTGCTCGCC
CACTTGCCTG AGACATCGCC GGTTGTCGGC ACGCCGCTGC CGATTCTCGC TGGCATGTCG
CGCAAATCGA TGCTCGGGGC CGTCGTGAAC CGGCCTGCGC CGGAAAGGGT GGCAGCAAGC
ATTGCAGCCG CCGTGTGCGC GGCTGAACGG GGGGCAGCGA TCATCCGCGT GCACGATGTG
GCGCAGACGG TGGATGCACT GAAAGTATGG GTGGCGACGC GCGACGCAGC GCGGCGCGCC
TGA
 
Protein sequence
MQCGRFTFTF ERPLVMGILN VTPDSFSDGG LYADPGKARL QAERLLAEGA DIIDIGGEST 
RPGAPPVPLA EELERVIPLV KELSDAGIPV SVDTYKPEVM RHALAAGADL INDIWGFRMP
GAIDAVRDSQ CGLCVMHMLG EPQTMQVGEP VYGDVVVDIR AFLEERVATM IKAGVAKNRV
SVDPGFGFGK TVEHNYALLA HLPETSPVVG TPLPILAGMS RKSMLGAVVN RPAPERVAAS
IAAAVCAAER GAAIIRVHDV AQTVDALKVW VATRDAARRA