Gene Bphy_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0846 
Symbol 
ID6242344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp944619 
End bp945650 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID642592616 
Productbeta-hexosaminidase 
Protein accessionYP_001857081 
Protein GI186475611 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0495446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA CTCCTGGCCC GGTGATGCTC GACGTCGTCG GCAAAGCCCT GAACGCCGAT 
GACGAGCGCC GCCTCGCGCA CCCAATGACG GGCGGCGTGA TCCTGTTTGC ACGTCACTTC
GAAAGCCGCT CGCAACTGGT CGCGCTGACC GACGCGATTC GCGCGACTCG CGACGACCTT
CTGATCGCCG TCGATCACGA AGGCGGCCGT GTGCAGCGCT TTCGCACCGA TGGCTTCACC
GTGCTGCCGT CGATGGGCAA GCTCGGCGCG CTGTGGGACG AGGATGTGCT GCGCGCGACC
AAAGTCACGA CGGCAGTCGG CTATGTGCTC GCATCCGAGT TGCGCGCGTG CGGCATCGAC
ATGAGCTTCA CGCCCGTGCT CGATTTGAAC TACGGTCACT CGCAGGTGAT CGGCGATCGC
GCGTTCCATC GCGATCCGCG CGTCGTGACG ATGCTGGCGA AGAGCCTGAA TCACGGCCTC
GCGCTCGCGG GCATGGCGAA CTGCGGGAAG CATTTTCCCG GTCACGGGTT CGCGACGGCG
GACTCGCATG TGGCTGTGCC CGTCGACGAA CGTACGCTCG ACCAGATTCT CAGCGAAGAC
GTCGCGCCGT ATGACTGGCT CGGACTCTCG CTCGCGTCGG TGCTGCCGGG GCATGTGATC
TATCCGAAGA TCGACAGCAA GCCGGCCGGT TTTTCGCGTG TGTGGATCCA GGACATCCTG
CGCAACAAGC TGGGATTCGA GGGCGCGATT TTCAGCGACG ATCTGTCGAT GGAAGCGGCG
CGCCAGGGCG GCACGCTGAC GGAAGCGGCC ACGGCCGCGC TCGAAGCGGG TGTCGACATG
GTGCTGATCT GCAATCAGCC CGACGAGGCA GGAAAGGTAC TGGACGCGCT GCGCGTCACG
CAATCGAACG AGTCGAAGCA GCGCCTTGCG CGCATGCGTC CGCGCGGCGA CGCGCCGTCA
TGGGCCGCAT TGATGGACGA GCCGCAGTAT CGACGGGCAC AGGCGCTGCT GCGCGAGACT
TTCGCTGCGT GA
 
Protein sequence
MKLTPGPVML DVVGKALNAD DERRLAHPMT GGVILFARHF ESRSQLVALT DAIRATRDDL 
LIAVDHEGGR VQRFRTDGFT VLPSMGKLGA LWDEDVLRAT KVTTAVGYVL ASELRACGID
MSFTPVLDLN YGHSQVIGDR AFHRDPRVVT MLAKSLNHGL ALAGMANCGK HFPGHGFATA
DSHVAVPVDE RTLDQILSED VAPYDWLGLS LASVLPGHVI YPKIDSKPAG FSRVWIQDIL
RNKLGFEGAI FSDDLSMEAA RQGGTLTEAA TAALEAGVDM VLICNQPDEA GKVLDALRVT
QSNESKQRLA RMRPRGDAPS WAALMDEPQY RRAQALLRET FAA