| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0841 |
|---|
| Symbol | |
|---|
| ID | 6242339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 940073 |
|---|
| End bp | 941398 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642592611 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_001857076 |
|---|
| Protein GI | 186475606 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0895588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC GTTATACTCT GCACATGCCC CTATCTCCGT TGGAAAGCCG TTTGCGCTAC
GAATTTCGCA ATGCGGAATT GTTGCGACAG GCTTTAACTC ACCGCAGTCA CAGTGCCACG
CATAATGAGC GGCTGGAATT TCTCGGCGAT TCCGTTCTGA ACTGCGCGGT GGCCGCGCTT
TTGTTCCAAC GTTTCGGGAA GCTGGACGAG GGTGATCTGT CCCGCGTTCG CGCCAATCTC
GTCAAACAGC AGTCGCTGTA TGAGATTGCT CAGGCGCTGA ATATCTCCGA GGGACTGCGG
CTCGGCGAAG GCGAATTGCG CAGCGGCGGC TTCCGCCGTC CGTCCATTCT GGCCGATACC
CTGGAAGCCA TTCTGGGCGC AATCTTCCTC GACGGCGGTT TTGACGCGGC GCAAACGGTC
ATCAAGCGGC TCTACGTGCC GATTCTCGAT CACATTGATC CGCGCACGCT CGGCAAGGAC
GCCAAAACGC TGCTGCAGGA ATACCTGCAG GGTCACAAGA TTCCCCTGCC GACCTACACC
GTCGTCGCCA CGCATGGTGC GGCACACAAT CAGCAGTTCG AGGTGGAGTG CACGGTGCCC
AAGCTGGACG TGAAAGTGTC CGGTTCAGGC GCTAGCCGTC GCGCGGCCGA GCAGGCTGCG
GCGAAAAAGG CGCTCGACGA GGTGATGGCT GCGGCGCCTG CCGTAGTATC CAAGACCAAG
CGCTCGAAGG GCGCTCGCGC GACCAGGCAG GAAGCCGAAA TCGTGCCGGG CGTGACGGGC
GTGCAGGCTG CGCTCGATCT GCGGGCGCCC GACAGCCGCA GGGCCGAACG CGCGTCACGG
GCCGAGGCGA AACCGGTGGG GCCGGAGGTG CCGTCGGCTG CACAGGCGGC TGCCGGCGCG
CCGCTCGCCG TCATCCGCGC AGCGCATGTG GAATATAGCC AGGACGTTGG GGGCGGCGAC
AAGGCCGATC GCGGCGAGAA GGGCGAGCGG CCGGCGCGGA TCGCGGACCG CGCTGCAGCC
GAGAAAGTCG CGCAGGAAAA GAGCGCGGAC CGACCGGAAG CGGCGCTGAA GCCGGTCGAG
CGTCAAACCG AGCGTCAGCA GGGCGCGGAT AAGCCCGACG CGCAGTCGCG CGCAGCGGAC
AAAGCCCCCG ACAAGGCGGT GGACAAACCT GCTGACAAGC CCGCCGAAAA ACCCGACACC
AACGCCCGCA GCGCAGACAA ACCCGCGTCC CGCGCTCGCG AGGCCGCGCC CGGCACAAGC
ACGGGCGATC TCGAACCCGG CGTCGCCGGC GCGGTGCATA CCCGCGTGGC CGATGCCGGT
CATTGA
|
|---|
| Protein sequence | MRPRYTLHMP LSPLESRLRY EFRNAELLRQ ALTHRSHSAT HNERLEFLGD SVLNCAVAAL
LFQRFGKLDE GDLSRVRANL VKQQSLYEIA QALNISEGLR LGEGELRSGG FRRPSILADT
LEAILGAIFL DGGFDAAQTV IKRLYVPILD HIDPRTLGKD AKTLLQEYLQ GHKIPLPTYT
VVATHGAAHN QQFEVECTVP KLDVKVSGSG ASRRAAEQAA AKKALDEVMA AAPAVVSKTK
RSKGARATRQ EAEIVPGVTG VQAALDLRAP DSRRAERASR AEAKPVGPEV PSAAQAAAGA
PLAVIRAAHV EYSQDVGGGD KADRGEKGER PARIADRAAA EKVAQEKSAD RPEAALKPVE
RQTERQQGAD KPDAQSRAAD KAPDKAVDKP ADKPAEKPDT NARSADKPAS RAREAAPGTS
TGDLEPGVAG AVHTRVADAG H
|
|---|
| |