Gene Bphy_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0837 
Symbol 
ID6242335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp935266 
End bp936774 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content65% 
IMG OID642592607 
Productprotease Do 
Protein accessionYP_001857072 
Protein GI186475602 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC TCTCGGTGCG CAAATTCTTC GCGGCCGCAG TACTGGTGGC TTGCCTGCCG 
CTCGCGCCGC ACACGGCGTC GGCGGCGCCT GCTGCCAATC TGCCCGATTT CACCGATCTG
GTCGACAAGG TCGGGCCGGC CGTCGTCAAC ATTCGCACCA CGGCGCGCGT CTCCAACAGC
ACGCGCGGGT TGCCGCCCGG CATGGACGAC GGCGACATGT CTGAGTTCTT CCGGCGGTTC
TTCGGCATTC CGATGCCTAA CTCGCCGCAG TCGCCGGGCA CGCCGAATTC GCCGCGGGGC
GGTAACAACG GCAACAACGA CCAGGATCAA TCGCCCGACA ACGGTCCCGA TACCGAGCAG
AACAGCGGCG TCGGCTCGGG TTTCATCCTG TCGCCGGACG GTTACGTGAT GACTAACGCG
CACGTGATCG ACGACGCGGA CACGATCTAC GTGACGCTCA CTGACAAACG CGAATTCAAG
GCCAAGCTGA TTGGCGTCGA CGAGCGCACG GACGTGGCCG TCGTCAAGAT CAATGCAGCG
AACCTGCCGA CGGTACCGAT CGGCGATTCC AACAAGGTGC GCGTCGGCGA GTGGGTTGTC
GCGATCGGCT CGCCGTTCGG GCTCGAGAAC ACGGTGACGG CGGGCATCGT CAGTGCGAAG
GGGCGCGACA CGGGCGACTA TCTGCCGTTC ATCCAGACGG ATGTGGCCGT GAATCCAGGC
AATTCGGGCG GCCCGCTGAT CAACATGCAG GGCGAGGTGA TTGGCATCAA CTCGCAGATC
TACAGCCGGA CGGGCGGCTT CATGGGCATC TCGTTCGCGA TTCCAATCGA CGAAGCGATG
CGCGTCGCCG ATCAGCTGAA GGCGTCGGGC AAGGTCGTGC GCGGACGGAT TGCCGTCGCG
ATCGGAGAGG TGACGAAAGA CGTTGCGGAT TCGCTCGGCT TGCCGAAGGC GCAGGGTGCG
CTCGTCAGCA GCGTCGAGCC GGGCGGCCCG GCCGACAAGG CAGGCGTGCA ACCTGGTGAC
ATCATCCTCA AGTTCAACGG TCACAACGTG GACACGGCGA CGGATCTGCC GCGCATGGTC
GGCGATACGA AGCCGGGCAC GAAGGCGACG ATCACGCTGT GGCGCAAAGG CCAGACCCGC
GAGGTGCCGG TGACCGTCGC CGAAATGCAG CCTGAGAAGG CCGCGAAGGC CGACCAGAAG
AAGGCGCCGA CGCCCAAGCC GCGTGCATCG AACGCGTTGG GCGTGGCGGT CAGCGATATC
CCCGCCGAAC AGATGAAGTC GCTGAAGCTG CATAACGGCG TGCAGGTCGA TGCCGTCGAC
GGTCCGGCCG CGCGTGTGGG CTTGCAACGC GGGGACATCA TCCTGCGCGT TGGCGACACG
GATATCACGA GCGCGAAGCA GTTCGAAGAA GTCACCTCGC ATCTCGACGC GTCGAAGATG
GTCGCGCTGC TGGTCCGCCG CGGGGAAAAC ACGCAGTTCG TGCCCGTTCG TCCGCGCGCG
TCGAAGTGA
 
Protein sequence
MTILSVRKFF AAAVLVACLP LAPHTASAAP AANLPDFTDL VDKVGPAVVN IRTTARVSNS 
TRGLPPGMDD GDMSEFFRRF FGIPMPNSPQ SPGTPNSPRG GNNGNNDQDQ SPDNGPDTEQ
NSGVGSGFIL SPDGYVMTNA HVIDDADTIY VTLTDKREFK AKLIGVDERT DVAVVKINAA
NLPTVPIGDS NKVRVGEWVV AIGSPFGLEN TVTAGIVSAK GRDTGDYLPF IQTDVAVNPG
NSGGPLINMQ GEVIGINSQI YSRTGGFMGI SFAIPIDEAM RVADQLKASG KVVRGRIAVA
IGEVTKDVAD SLGLPKAQGA LVSSVEPGGP ADKAGVQPGD IILKFNGHNV DTATDLPRMV
GDTKPGTKAT ITLWRKGQTR EVPVTVAEMQ PEKAAKADQK KAPTPKPRAS NALGVAVSDI
PAEQMKSLKL HNGVQVDAVD GPAARVGLQR GDIILRVGDT DITSAKQFEE VTSHLDASKM
VALLVRRGEN TQFVPVRPRA SK