| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0837 |
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| Symbol | |
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| ID | 6242335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 935266 |
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| End bp | 936774 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642592607 |
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| Product | protease Do |
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| Protein accession | YP_001857072 |
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| Protein GI | 186475602 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTC TCTCGGTGCG CAAATTCTTC GCGGCCGCAG TACTGGTGGC TTGCCTGCCG
CTCGCGCCGC ACACGGCGTC GGCGGCGCCT GCTGCCAATC TGCCCGATTT CACCGATCTG
GTCGACAAGG TCGGGCCGGC CGTCGTCAAC ATTCGCACCA CGGCGCGCGT CTCCAACAGC
ACGCGCGGGT TGCCGCCCGG CATGGACGAC GGCGACATGT CTGAGTTCTT CCGGCGGTTC
TTCGGCATTC CGATGCCTAA CTCGCCGCAG TCGCCGGGCA CGCCGAATTC GCCGCGGGGC
GGTAACAACG GCAACAACGA CCAGGATCAA TCGCCCGACA ACGGTCCCGA TACCGAGCAG
AACAGCGGCG TCGGCTCGGG TTTCATCCTG TCGCCGGACG GTTACGTGAT GACTAACGCG
CACGTGATCG ACGACGCGGA CACGATCTAC GTGACGCTCA CTGACAAACG CGAATTCAAG
GCCAAGCTGA TTGGCGTCGA CGAGCGCACG GACGTGGCCG TCGTCAAGAT CAATGCAGCG
AACCTGCCGA CGGTACCGAT CGGCGATTCC AACAAGGTGC GCGTCGGCGA GTGGGTTGTC
GCGATCGGCT CGCCGTTCGG GCTCGAGAAC ACGGTGACGG CGGGCATCGT CAGTGCGAAG
GGGCGCGACA CGGGCGACTA TCTGCCGTTC ATCCAGACGG ATGTGGCCGT GAATCCAGGC
AATTCGGGCG GCCCGCTGAT CAACATGCAG GGCGAGGTGA TTGGCATCAA CTCGCAGATC
TACAGCCGGA CGGGCGGCTT CATGGGCATC TCGTTCGCGA TTCCAATCGA CGAAGCGATG
CGCGTCGCCG ATCAGCTGAA GGCGTCGGGC AAGGTCGTGC GCGGACGGAT TGCCGTCGCG
ATCGGAGAGG TGACGAAAGA CGTTGCGGAT TCGCTCGGCT TGCCGAAGGC GCAGGGTGCG
CTCGTCAGCA GCGTCGAGCC GGGCGGCCCG GCCGACAAGG CAGGCGTGCA ACCTGGTGAC
ATCATCCTCA AGTTCAACGG TCACAACGTG GACACGGCGA CGGATCTGCC GCGCATGGTC
GGCGATACGA AGCCGGGCAC GAAGGCGACG ATCACGCTGT GGCGCAAAGG CCAGACCCGC
GAGGTGCCGG TGACCGTCGC CGAAATGCAG CCTGAGAAGG CCGCGAAGGC CGACCAGAAG
AAGGCGCCGA CGCCCAAGCC GCGTGCATCG AACGCGTTGG GCGTGGCGGT CAGCGATATC
CCCGCCGAAC AGATGAAGTC GCTGAAGCTG CATAACGGCG TGCAGGTCGA TGCCGTCGAC
GGTCCGGCCG CGCGTGTGGG CTTGCAACGC GGGGACATCA TCCTGCGCGT TGGCGACACG
GATATCACGA GCGCGAAGCA GTTCGAAGAA GTCACCTCGC ATCTCGACGC GTCGAAGATG
GTCGCGCTGC TGGTCCGCCG CGGGGAAAAC ACGCAGTTCG TGCCCGTTCG TCCGCGCGCG
TCGAAGTGA
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| Protein sequence | MTILSVRKFF AAAVLVACLP LAPHTASAAP AANLPDFTDL VDKVGPAVVN IRTTARVSNS
TRGLPPGMDD GDMSEFFRRF FGIPMPNSPQ SPGTPNSPRG GNNGNNDQDQ SPDNGPDTEQ
NSGVGSGFIL SPDGYVMTNA HVIDDADTIY VTLTDKREFK AKLIGVDERT DVAVVKINAA
NLPTVPIGDS NKVRVGEWVV AIGSPFGLEN TVTAGIVSAK GRDTGDYLPF IQTDVAVNPG
NSGGPLINMQ GEVIGINSQI YSRTGGFMGI SFAIPIDEAM RVADQLKASG KVVRGRIAVA
IGEVTKDVAD SLGLPKAQGA LVSSVEPGGP ADKAGVQPGD IILKFNGHNV DTATDLPRMV
GDTKPGTKAT ITLWRKGQTR EVPVTVAEMQ PEKAAKADQK KAPTPKPRAS NALGVAVSDI
PAEQMKSLKL HNGVQVDAVD GPAARVGLQR GDIILRVGDT DITSAKQFEE VTSHLDASKM
VALLVRRGEN TQFVPVRPRA SK
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