| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0818 |
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| Symbol | |
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| ID | 6242316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 916407 |
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| End bp | 919685 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642592588 |
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| Product | ribonuclease |
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| Protein accession | YP_001857053 |
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| Protein GI | 186475583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00158382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.513461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TGTTGTTCAA TGCGACGCAG CAGGAAGAAT TGCGCGTCGC CATCGTCGAT
GGGCAAAAAC TCATCGACAT CGACATCGAA ACTGCCGGGC GTGAACAACG CAAAGGCAAT
ATCTACAAGG GGATCGTGAC CCGCATCGAG CCTTCGCTCG AAGCCTGCTT CGTCAACTAC
GGTGAAGACC GCCACGGTTT TCTCCCGTTC AAGGAAGTCG CTCGCCAGTA CTTCCGCGAA
GGCGTCGACA TGCGCTCCGC GCGCATCCAG GATGCCCTCA AGGAAGGCCA GGAACTGATC
GTCCAGGTTG AGAAGGAAGA ACGCGGCAAC AAGGGCGCGG CCCTCACCAC GTTCATCTCG
CTCGCCGGCC GCTACCTCGT GCTGATGCCG AACAATCCGC GTGGCGGCGG TGTGTCGCGC
CGGATCGAAG GCGACGACCG CCAGGAACTG CGCGAAACCA TGTCGCAGCT GCAACTGCCC
GAGGGCATGA GCATCATCGC GCGCACGGCG GGCATCGGCC GCAGCGCCGA AGAGTTGCAG
TGGGACCTGA ACTACCTCAT GCAGTTGTGG CGCGCCATCG AGGCCGCGTC GCAAAGCGGC
ACGCAAGGTC AGCCGATGCT GATCTATCTC GAATCGAGCC TCGTGATCCG CGCGATTCGC
GACTACTTCC AGCCGGACAT CGGCGAAATT CTGATCGACA CCACGGAAAT CCATGACCAG
GCGCGTGCCT TCATGGACAT CGTGATGCCG GACAATGTCA ACAAGGTGAA GCGGTATCAC
GACGACGTGC CGCTTTTCTC GCGTTTCCAG ATCGAGCACC AGATCGAGAC GGCCTATTCG
CGCACGGTGC CGCTGCCGTC GGGCGGCGCG ATCGTGATCG ACCACACGGA AGCGCTCGTC
GCGATCGACG TGAACTCGGC GCGCGCCACC AAGGGCGCCG ACATCGAGGA AACGGCCACA
CGCACGAACC TCGAAGCCGC CGACGAGGTC GCTCGTCAGT TGCGTCTGCG CGATCTGGGT
GGCCTGATTG TGATCGACTT CATCGACATG GAGTCGGCCA AGAGCCAGCG CGAAGTCGAG
CAGCGTCTGA AGGACGCGCT CAAGCACGAC CGGGCACGCG TCCAGATGGG CAAGATTTCG
CGCTTCGGCC TGATGGAACT GTCGCGTCAG CGTCTGCGCC CGGCGTTGTC GGAAGGCAGC
CACGTGACCT GCCCGCGCTG TAACGGCACG GGCCACATCC GCGATACCGA ATCGTCCGCG
CTGCAAGTGC TGCGGATCAT TCAGGAAGAA GCGATGAAGG AAAACACGGC AGCCATTCAC
TGCCAGGTGC CCGTAGAGGT CACGGCTTTC CTGCTCAACG AAAAGCGCTC GGAAATCAAC
AAGATCGAGT CGCGCTTCAA GGTCAACGTC GTGCTGGTGC CGAACAAGCA CCTCGACACG
CCGCACTACA AGCTCGAGCG CCTGCGCCAC GACGACGCCC GCCTCGACGA TCCGCGAGCG
TCGTGGAAGA TGGCCGAAGA AGCAGCTCGC GAACTGGAGT CCGAAACGGG CTACAGCAAG
CGCACGGAAG AAGTGAAGCC GAAGCAGGAA GCAGCCGTCA AGGGCATCAC GCCCGAGAAG
CCGGCGCCGA GCGCACCTGT GCGCACGCCG GCTCCTGCTG CCGCTACCGT CGAAGTGAAG
CCTGCCACGG GCGGCTTCAT CGGTTGGCTG AAGGGCCTGT TCGGCATGCA GCCAGCTGCC
CCGGCGCCCG CACCCGCGCC TGTCGAGAAG GCGGCGAAGC CAGTACGCGG CGAACGCACC
GAGCGCGGCG AGCGCACGGG CGAGCGCGGC GGCGACCGCA ACCGCAACCG TCGCAGCGGC
GGCGCGGGTG GCCGCGATGC GGCAGGCCGC GGCGAAGGTA CGGCAACACA AGGCCGTCAG
GGTCAGCCGT CGCAGCGCGG CGAACGTCAG GAACGCGAGC CGCGTGAAGC ACGTGAACCA
CGTGGCGGTC GCGAGCCGCG CGAAGGCCGC GAAACACGTG AACCGCGTGA AGCACGCGAG
GCACGTCCGG AACGTGTGGA ACGCGGTCAG GAGCGCGCCG AACGTGCGGA AGCCGCTGAA
GCTCGTGGCG AGCGTCAGGA ACGTGGCGAG CGCCGTGAAC GTGGTGAACG CGCCGAACGC
GGCGAACGTC GCAAGCAACA GACGGAAGCC GCTGAAGCAC TGAGCCAGAA CGAAGCACAA
GCCGATGTCG CCGCGCAGGC GCAAGCGAAT CTGGCGGGCG GCGCTGTCCC CGGCGACGAA
GCACGCGATG GCGAAGAGCG TCGCCGTCGC CGTCGCGGTC GCCGTGGCGG CCGTCGCGAG
CGCGACGAGG AAGGCGTGAA CGTGAACACG GCCGCCGATG TCGCGGAAGC GGAAGGCGAA
ACGGCTGCGG CCGCGTCGAC GGAAGCGCCC GTGCGCGCTC CGGAGCACAC GGGCCGTCAC
GAAGCGCAAC CGCAAGCCGT TGAAGCTGTC CCGCAGCTGC CAGTGCAGGA AGTGAAGCCG
GTCGAAGTCG TCGTGGCAGC CGTCGCGACG AGCGCAGCCG TCGTCAGCGA ACTGCATGCA
TCCGCTGAGA CGCCGGCCCT CGCCGTCGAA AAGGCAGCGA AGACGGAAGC CATCGTGCCC
GCAGACGAAG CGCCCGCCGC GACGCAGGTC GAAGCGGCTC CCGTCGAGCC GGCAACATTC
GAGACGCAGC CTGTCGAAGC TGCCGCGCGT GTCGCCCCTG TCGCAACAAC GGAAGCCCCC
GCGCAGGTCG AAACCGTCGC GGCTGCGCCT GTCGCAGTTG AACCGGCCAT CGAACCCGTT
GCGGCCGCAC CGGCAGCAGC ACCTGTGGAA GTCGCGCAAC CAGCGGCCGA AACACATGTC
GCAGCGGAAC CGGTCGTCGA GCCGGTCGTC GAGCCGGTCG TCGAGCCGGT CGTCGAACCT
GCCGCTGAAG CCGCCGCTGC AGAAGTGACG CAAGCGCAAC CTGTTGTGGA ACCCGTTCGG
GAACCGGCTG AAACGCAAGC TGCGCCCGTC GCCGCAGCGG CCGAACCGCA ACCTGTTCGC
ACGAACGGCG CAGCAGCCGG CCAGTCGGCG GATGCGCTCA AGTCGATGCT GGAAAGTGCC
GGCCTTGTCT GGGTCAACAC CGACTCCGAT AAGCTGCGCG CTGCCCAGGA AGCTGCGGCG
CAGACCGTGA AGCCCGCGCG CGTTGCGCGC GAGCGCAAGG CGCTTCCTCC CGTCGATACG
ACGCCGATGC AGCAGGTCGA AACGGCGAAG CATCAGTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGIVTRIE PSLEACFVNY
GEDRHGFLPF KEVARQYFRE GVDMRSARIQ DALKEGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDDRQEL RETMSQLQLP EGMSIIARTA GIGRSAEELQ
WDLNYLMQLW RAIEAASQSG TQGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVNKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAT RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRSEIN KIESRFKVNV VLVPNKHLDT
PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RTEEVKPKQE AAVKGITPEK
PAPSAPVRTP APAAATVEVK PATGGFIGWL KGLFGMQPAA PAPAPAPVEK AAKPVRGERT
ERGERTGERG GDRNRNRRSG GAGGRDAAGR GEGTATQGRQ GQPSQRGERQ EREPREAREP
RGGREPREGR ETREPREARE ARPERVERGQ ERAERAEAAE ARGERQERGE RRERGERAER
GERRKQQTEA AEALSQNEAQ ADVAAQAQAN LAGGAVPGDE ARDGEERRRR RRGRRGGRRE
RDEEGVNVNT AADVAEAEGE TAAAASTEAP VRAPEHTGRH EAQPQAVEAV PQLPVQEVKP
VEVVVAAVAT SAAVVSELHA SAETPALAVE KAAKTEAIVP ADEAPAATQV EAAPVEPATF
ETQPVEAAAR VAPVATTEAP AQVETVAAAP VAVEPAIEPV AAAPAAAPVE VAQPAAETHV
AAEPVVEPVV EPVVEPVVEP AAEAAAAEVT QAQPVVEPVR EPAETQAAPV AAAAEPQPVR
TNGAAAGQSA DALKSMLESA GLVWVNTDSD KLRAAQEAAA QTVKPARVAR ERKALPPVDT
TPMQQVETAK HQ
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