| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0787 |
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| Symbol | |
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| ID | 6242285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 882947 |
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| End bp | 884341 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642592555 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001857022 |
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| Protein GI | 186475552 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0509974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCCG CCACGCGGCA ACTGATTTAC GTATCAAGAG ATCCCAGCGC TGAGTTGAAC
ACGCGCTTTC ATGAGCGCGG GTGGCATGTC GAGGTCGTCG GCTCAGCTCG CGACGCCCGA
CGCGCCGTGC GCTCGGGGAT GGCGGCGGGC GGCCTGCTCG ATCTGTCGAG CTGTTTCCAG
CAGCACGAAA TCGCGGCCTT CGAATCGTGC CTGACCATGC CCAACGTCGG CTGGGTCGCC
ACCACGATGG CCGGCCAGCT GCAGGACGCT GCATTGCGCC GGCTCGTGCG CGATTACTGT
TTCGATTACG TGACCGTGCC TTATTCGGGC GACCGCATCG TCGATTCCGT CGGCCATGCT
TACGGCATGG TGTCGCTCGG CGAGCCTGCA TCGAACGATG CGTCGCAAGG CGGCTCGGAA
GGCGAAATGG TCGGCTCGTG CGACGCGATG CTCGCGCTGT TCCGTTCTAT CCGCAAAGTG
GCGATGACGG ACGCCCCCGT GTTCATCTCG GGTGAATCCG GCACGGGCAA GGAACTCACG
GCCGTCGCCA TTCACGAGCG CTCGTCGCGC CGCAATGCGC CGTTCATCCC CATCAACTGC
GGGGCGATTC CGCCGCATCT GCTGCAATCG GAACTGTTCG GCTACGAGCG CGGGGCCTTC
ACAGGCGCCA ACCAGCGCAA GATCGGCCGC GTCGAAGCGG CGAACGGCGG CACGCTGTTC
CTCGATGAAA TCGGCGACCT GCCGCTCGAA AGCCAGGCGA GCCTGCTGCG CTTCCTGCAG
GAGCGCAAGG TCGAGCGGCT GGGCGGGCAC GGCTCGATCG AGGTGGACGT GCGGATCATT
TCGGCGACAC ACGTCGACAT GAACACGGCG ATGATCGAAG GCCGCTTCCG CTCGGACCTC
TATCATCGGC TTTGCGTGCT GCAGATCGAT GAGCCGCCGC TGCGCGCGCG CGGCAAGGAC
ATCGAACTGC TTGCGCGGCA TATGCTCGAA CGTTTCAGGA AAGACGCCAG CCGTCGGCTG
CGCGGCTTTG CGCCCGACGC GATTGCGGCG CTCCACAACT ACAGCTGGCC GGGTAACGTG
CGAGAACTGA TCAACCGCGT GCGGCGGGCG ATCGTGATGT CGGAAGGGCG GGCCATCACG
GCGCGCGATC TCGAACTGGC CGAATACGTG GAGATCGTCC CTGTGTCGCT GGCACAGGCG
CGCGAGGCGG CCGAGCGGCA GGCGATCGAG CTGGCCTTGT TGCGTCATCG CGGGCGTCTC
GGCGACGCGG CACAGGAACT CGGGATTTCG CGCGTGACGC TGTACCGGCT GTTGTGCTCG
CACGGTATGC GGCATATGGA AAGCGAGCCG CTCGCGCAAC ACGCGGACAT GCCGTCGACG
ATGCCGCATC TGTAA
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| Protein sequence | MESATRQLIY VSRDPSAELN TRFHERGWHV EVVGSARDAR RAVRSGMAAG GLLDLSSCFQ
QHEIAAFESC LTMPNVGWVA TTMAGQLQDA ALRRLVRDYC FDYVTVPYSG DRIVDSVGHA
YGMVSLGEPA SNDASQGGSE GEMVGSCDAM LALFRSIRKV AMTDAPVFIS GESGTGKELT
AVAIHERSSR RNAPFIPINC GAIPPHLLQS ELFGYERGAF TGANQRKIGR VEAANGGTLF
LDEIGDLPLE SQASLLRFLQ ERKVERLGGH GSIEVDVRII SATHVDMNTA MIEGRFRSDL
YHRLCVLQID EPPLRARGKD IELLARHMLE RFRKDASRRL RGFAPDAIAA LHNYSWPGNV
RELINRVRRA IVMSEGRAIT ARDLELAEYV EIVPVSLAQA REAAERQAIE LALLRHRGRL
GDAAQELGIS RVTLYRLLCS HGMRHMESEP LAQHADMPST MPHL
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