| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0770 |
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| Symbol | rimM |
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| ID | 6242268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 866650 |
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| End bp | 867345 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642592538 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001857005 |
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| Protein GI | 186475535 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.149382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.116186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGAGC GTGATTCGGG TAGTTCAGGT CGCGCGAAGG CGAAAAGGCA GCCTGGCGCG
AAGGCGCCAT TTGGCCCGTT CGTCCGCAAG CCGGTCGAGA AGGTCGAGGC GAATGCCGCA
GCGGCGCAGA AAGCTCGCGC TGAATCGGCG GAAAGCTGGC CCGACGACGC AGTCGAAGTC
GGCGCAATCG TCGACGCATA CGGTCTCAAA GGTTGGGTGA AGGTGGCCGC GCACGCGGAC
GCCGGTCATG GCGGCGACGC CTTGCTCAGC ACGAAACGCT GGTGGCTCGA GAAGGGCCGC
GAGCGTCAAT CGACGCCCTG CCTGCAGTCA AAGGTTCACG GCGACAGCAT CGTTGCGCAA
CTGGGCGGCA CTGCCGACCG CGATGCTGCC CTTGCGTTGC GCGGTCACCG CGTGTACGTC
CGCCGCCGCG ATTTCCCCGC GCTCGGAACC GACGAATATT ACTGGGTCGA CCTGGTTGGT
CTCGATGTCG TGAACGAGGC GGGCATCGAA CTCGGTAAGG TTGCAGATCT GATCGACAAC
GGTGCGCAGT CGGTGTTGCG CATCGAGTAT CCGGCTATTG GCAAAGACGG CAAGCCGGTG
ATCGGCGAAC GCTTGATCCC GTTCGTCGGC GTCTATGTCA AAACGGTGGA TCAGGCGGCG
AAGAAGATCA TCGTCGACTG GGAAGCCGAT TACTAG
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| Protein sequence | MSERDSGSSG RAKAKRQPGA KAPFGPFVRK PVEKVEANAA AAQKARAESA ESWPDDAVEV
GAIVDAYGLK GWVKVAAHAD AGHGGDALLS TKRWWLEKGR ERQSTPCLQS KVHGDSIVAQ
LGGTADRDAA LALRGHRVYV RRRDFPALGT DEYYWVDLVG LDVVNEAGIE LGKVADLIDN
GAQSVLRIEY PAIGKDGKPV IGERLIPFVG VYVKTVDQAA KKIIVDWEAD Y
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