| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0758 |
|---|
| Symbol | |
|---|
| ID | 6242256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 854634 |
|---|
| End bp | 855581 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642592526 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_001856993 |
|---|
| Protein GI | 186475523 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.539161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGA CTCCCCGTGC CGCTATGATC GGGCGCATCT CGATAAAGAG CGGGCGATTG
CCGATGCAGA CTTCACAGGC CAACTTTGCT TCGGCGACAC CGCCTTTCGA GTACTCGCGG
ATCACCACGC GCGACGCTCT CGCGCTGCCG CTTTATCGCT GGCATGTCGC GGGGCCGCGC
CGTGCGACGA TCGCCCTCAT TCACGGCCTG GCCGAACACG CGCGTCGATA TGCAACGCTT
GCCCATACGC TGACTGCGCA CGGCATCGAG CTGGTCGCTG TCGATCTGCG CGGCCACGGT
AACGCGCCGG GCCGGCGCGC GTGGGTCGAA CGTTTCGACG ACTACCTGCT GGATGCGCAT
GCGCTCGTCG CCGAGGCAGC CCGCAACGGC GGCCCGCTGT TCCTGATGGG CCACAGCATG
GGCGGAGCAA TCGCGGCGCT GCACGCGATC GAACGGCACG CGGACGACGC GCGCGATCTG
AGCGGCCTGA TCCTGTCGAG TCCCGCACTC GCGCCCGGCC GCGACGTGCC GCGCTGGATG
CTCGCGTTGA GCCAAAAGAT CAGCCTGGTA TGGCCGCGTT TCCCCGCCAT GAAGATCGAT
GCAACGCTGC TGTCGCGCGA TCAACACGTG GTCGCGGCCA ACCGCAACGA TCCCCTCGTG
CATCACGGCG CGATTCCCGC GCGCACGGGC GCCGAGCTCC TGCTGGCGAT GCAGCGCATC
GAACTGGGTC GCGCCCGTCT GCGCACGCCG CTTCTCATCT GGCACGGCAG CGCCGACAAG
CTCACAGAAC CGCAAGGCAG CCGCGACTTC GGCGCGCATG CCGGCTCGCC CGACAAAACG
CTGACGCTCT ACGACGGCAG TTATCACGAG ACGATGAACG ACCTCGACCG CGAACGCGTG
ATCGACGCAC TCGTCGCGTG GATAGTGGCG CGTTCGGAGC GAGGCTGA
|
|---|
| Protein sequence | MARTPRAAMI GRISIKSGRL PMQTSQANFA SATPPFEYSR ITTRDALALP LYRWHVAGPR
RATIALIHGL AEHARRYATL AHTLTAHGIE LVAVDLRGHG NAPGRRAWVE RFDDYLLDAH
ALVAEAARNG GPLFLMGHSM GGAIAALHAI ERHADDARDL SGLILSSPAL APGRDVPRWM
LALSQKISLV WPRFPAMKID ATLLSRDQHV VAANRNDPLV HHGAIPARTG AELLLAMQRI
ELGRARLRTP LLIWHGSADK LTEPQGSRDF GAHAGSPDKT LTLYDGSYHE TMNDLDRERV
IDALVAWIVA RSERG
|
|---|
| |