| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0756 |
|---|
| Symbol | |
|---|
| ID | 6242254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 852859 |
|---|
| End bp | 853782 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642592524 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_001856991 |
|---|
| Protein GI | 186475521 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG GTTTCTATTC ACATGCAGAC TGTCTGCAGC ATGAGATGGG TCAATGGCAT
CCCGAATGCC CGGCCCGGCT GCAGGCAATC GAAGACCAGT TGATCGCAAG CCGCATCGGC
GAGCTGATCG AGCGCGAGTC CGCACCGCTT GCCGACGAAG CCGCGCTGTT GCGCGTGCAT
ACGAAGGCGC ACGTCGACTA CCTCCGCGCA CGCTCGCCGC AGAGCGGCTA CGCTGAGATC
GACCCCGATA CGTCGATGAA CCCGCACACG TGGACGGCCG CGTTGCGCGC AGCGGGGGCA
GCCGTCGCGG CCACCGACGC CGTGATCGAA GGCCGCTACG ACAACGCGTT TTGCAGCGTG
CGCCCGCCGG GCCATCATGC CGAGCCTGCA CGCGCCATGG GTTTCTGTTT CTTCAACAAT
GTCGCGATCG CCGCGCGGCA TGCGCTCGAG GTGCATAAGC TGGAGCGCGT GGCGATCATC
GATTTCGACG TGCATCATGG CAATGGCACG GAGGCCGCGT TTTCGAACGA CGCGCGCGTG
CTGATGTGCA GCATCTTCCA GCACCCGTTC TATCCGTTCA CGGGTGCCGA CAACCAGGCA
CCGAACATGT GCAACGTGCC GATCGCGGCA CGCTCGAAAG GCATGGTCGT GCGCGAAGCC
ATCGACATGA TCTGGCTGCC TCGACTCGAC GCATTCAAGC CGCAGATGCT GTTCGTGTCG
GCAGGCTTCG ACGCGCACCG TGAGGACGAT CTTGGCAACA TGGCGCTCGT CGAGGACGAC
TATGCGTGGA TCACACAGCA GATCCGCCTG GTCGCCGACA AGTATGCGAA AGGGCGCATC
GTCAGCTGCC TGGAAGGCGG CTACAACCTG TCGGCGCTCG GACGCAGCGT CGTCGCGCAC
GTAAGGGCGC TCGCGGATAT CTGA
|
|---|
| Protein sequence | MATGFYSHAD CLQHEMGQWH PECPARLQAI EDQLIASRIG ELIERESAPL ADEAALLRVH
TKAHVDYLRA RSPQSGYAEI DPDTSMNPHT WTAALRAAGA AVAATDAVIE GRYDNAFCSV
RPPGHHAEPA RAMGFCFFNN VAIAARHALE VHKLERVAII DFDVHHGNGT EAAFSNDARV
LMCSIFQHPF YPFTGADNQA PNMCNVPIAA RSKGMVVREA IDMIWLPRLD AFKPQMLFVS
AGFDAHREDD LGNMALVEDD YAWITQQIRL VADKYAKGRI VSCLEGGYNL SALGRSVVAH
VRALADI
|
|---|
| |