| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0722 |
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| Symbol | |
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| ID | 6242220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 814002 |
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| End bp | 815849 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642592490 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001856957 |
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| Protein GI | 186475487 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.434562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAG TTTTCGACCG CGCGTATAGC GCGCATCGTG ACGGCCGGCT CGACGACGCC
GAGCGCGGCT ATCGCGCCAC CCTCGATCTC GATCCCGCTC ACGTCGACGC GCTGCATCTG
CTCGGCGTGC TGCGCCATCA GCAAGGCCAG CACGAGGAAG CGGCCGACCT CGTGCGCCGC
GCTGCCGACT TGCGCCCGCA AGATGCCGCG TTGCAGCTGA ACCTCGGCAA TGCGCTGAAG
GCGCTCGGCC GTCTCGACCA GGCAATCGAA CGCTTTCGCA ATGCGCTGAC GCTCGCGCCG
ACGTTTCCGA TGGCGCACTA CAACCTGGGC AACGCGTACG CGCTCGCGGG GCGCCATGAA
GACGCCGTCG ATGCGTTCCA GAAGTCGCTG CGCCTGCAGC CGATGGACGC GTCGTCACAC
GTCAATCTCG GCAACGCGCT GCATGCGTTG GGCAGGCACC GTGAAGCGGC CGATTCGTTC
CGGCGCGCGC TCGAACTGCG GCCCGGCCAT GCGGGCGCGC ACAACAACAT GGGCATGGCG
CTCAACGCGC TCGGTTCCGC GACGGAGGCA GGCGCCCATT TCCGCGCGGC GCTGAAGATT
GAGCCGCGCT TCGTCGCCGC GCGTTTCAAC CTCGCCAATA CACTCGACGC GACGGGTCAG
CATGAACAGG CCGTCACGGA GTTCGAAGCG GTCCTTGCGA TGCAGTCGAG CTTGCCGCCC
GCTTTGTTCG GCCTCGGTAA CGCGCTCGCG TCGCTTGGCC GTCATGCAGA AGCGCGGCCG
CGTTTCGAAC GCGCCGTTGG TCTTGATCCG GCCTTTGCGC TCGCGTGGCT GAGCCTCGGC
GCCGCGCATC ACGCGCTCGG CGCGCACGAC GCTGCCGTGC GCGCTTTCGA CCAGGCATTG
CGTCTGCGTC CCGATCTGCC GATGGCGCAT ATGAATCGCG GCGTCGCGCT GCTCACGCTG
GGCGACTTCA AGCGTGGACT GCCGGAATAT GAATGGCGGC TGGAAAACGC GGCCGCGGCG
CCGGACGCGA CGGCGCTGCC GCGCTGGAAC GGCGAGCCGA TCGAAGGAAA GACGTTGTTC
CTGCACGCCG AGCAGGGTTT CGGGGACACG CTGCAATTCG TGCGTTTCGT CGAACAGGTG
GCGGGACGCG CCGTGCGGAT CGTACTTGAA GTGCAGCCGC AGCTCTTGTC CTTGCTCGCG
CCGACAGCGG AACAATGGCG CGTCACGCTG ATACCGCAAG GCGCGCCGCG GCCGCGCGCC
GATTTGCAGT GCCCGCTGCT GAGCCTGCCA TTCGCACTCG GCACGGAACT CGACACGATT
CCGGCACGCA CGCCTTATCT GCAAGCACCC GCCGCGTCCC GCCGCACGTG GCGCGGCTCG
CTCGGCGGGC ACGCGAAGCG CAAGCTCGGC CTCGCGTGGT CAGGACGCGC GCAGCGTCAG
GAGAATCGCT CGCTGCCGCT CGCTGCGCTC GAGCCGCTGT TCGCGCTCGC CGGCATCGAC
TGGATCGTGC TGCAGCCCTC GCTCACCGAC GAAGAACGCG CCGCGCTCGA TCGGCATCCG
CGCGCGAAGA ACATCCATCG CTTCGACGGG CGCATTCGCG ACTTCGCCGA CACGGCGGCC
ATTATCGAGC GGCTGGATGG CGTGGTGTCG GTCGATACGG CGATTGCGCA CCTGACGGGC
GCGCTCGGCA AGCCGCTTTG GCTGATGCTG CCGTTCGCGG CCGACTGGCG CTGGTTCACG
GACAATCGAA GCAGCCCGTG GTATCCGTCC GCGCGCCTCG TGCGGCAGCC CCGGCCGGGC
GCATGGCAGG AAGTCGTCGA AGACGTGGCG GCGGCGCTGC GCGCGTGA
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| Protein sequence | MHPVFDRAYS AHRDGRLDDA ERGYRATLDL DPAHVDALHL LGVLRHQQGQ HEEAADLVRR
AADLRPQDAA LQLNLGNALK ALGRLDQAIE RFRNALTLAP TFPMAHYNLG NAYALAGRHE
DAVDAFQKSL RLQPMDASSH VNLGNALHAL GRHREAADSF RRALELRPGH AGAHNNMGMA
LNALGSATEA GAHFRAALKI EPRFVAARFN LANTLDATGQ HEQAVTEFEA VLAMQSSLPP
ALFGLGNALA SLGRHAEARP RFERAVGLDP AFALAWLSLG AAHHALGAHD AAVRAFDQAL
RLRPDLPMAH MNRGVALLTL GDFKRGLPEY EWRLENAAAA PDATALPRWN GEPIEGKTLF
LHAEQGFGDT LQFVRFVEQV AGRAVRIVLE VQPQLLSLLA PTAEQWRVTL IPQGAPRPRA
DLQCPLLSLP FALGTELDTI PARTPYLQAP AASRRTWRGS LGGHAKRKLG LAWSGRAQRQ
ENRSLPLAAL EPLFALAGID WIVLQPSLTD EERAALDRHP RAKNIHRFDG RIRDFADTAA
IIERLDGVVS VDTAIAHLTG ALGKPLWLML PFAADWRWFT DNRSSPWYPS ARLVRQPRPG
AWQEVVEDVA AALRA
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