| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0686 |
|---|
| Symbol | pepN |
|---|
| ID | 6242184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 771230 |
|---|
| End bp | 774013 |
|---|
| Gene Length | 2784 bp |
|---|
| Protein Length | 927 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642592454 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001856921 |
|---|
| Protein GI | 186475451 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAT CACCCGGCGC GCTGTCCGTT GTTGCGCTGT ATACAACGCG CCGGCTTCGA
GCTTATTCCC GAACGCACAT CATGGCCGAT ACCGAAACGC CTCAAGTGAT CCGCCGCGCC
GACTACGCGC CGCCCGCCTT TCTCATCGAT ACCGTCGCGC TCGAGTTCGA TCTCGTGCCA
GAGCGCACAG TCGTCAGGAA TACGATGCGG ATCCGCCGCA ATCCCGACGC GGTGCGCGCC
ACGCATCTCG ACCTGATGGG CGAAGATCTG ACGTTCGTCG AAGCGTTGCT CGACGGCAAG
CCCTACGCCG ACGTGCACCC GCATGAGCAC GGTCTGACCG TCGACAACGT GCCCGATTCG
TTCGAACTGA CGCTGACGGG CATCTGCAAC CCCGCCGCGA ACACGACGCT GTCGGGCCTG
TATGTATCGA GCGGCAACTT CTTCACGCAG TGCGAGGCCG AGGGCTTCCG GCGCATCACG
TGGTTCCTCG ATCGCCCGGA CGTGATGGCA ACCTACACGG TCACGCTGCG CGCCGACAAG
GCCGCGTATC CGGTGCTGCT GTCCAACGGC AACCTTCTCG AACAGGGCGA GTTGCCCGAC
GGCCGTCATT TCGCGCGCTG GGAAGATCCG TTCAGGAAGC CGAGCTATCT GTTCGCGCTC
GTCGCGGGCA AACTCGTTGC GCTGGAAGAG CGCGTGAAGT CCGGTTCGGG CAAGGACAAG
CTGCTGCAGG TCTGGGTCGA GCCGCACGAT CTCGACAAGA CCCGTCATGC AATGGATTCG
CTGATCCATT CCATTCGCTG GGACGAAGCG CGCTTCGGCC TCGAACTCGA CCTGGACCGC
TTCATGATCG TCGCCGTGAG CGACTTCAAC ATGGGCGCGA TGGAGAACAA AGGGCTCAAC
ATCTTCAACA CGAAGTATGT GCTGGCGAAC CCCGAAACGG CCACCGATAC CGACTTCTCC
AACATCGAAG CCGTGGTCGG CCACGAATAC TTCCATAACT GGACGGGTAA TCGCGTCACG
TGCCGCGACT GGTTTCAACT GAGCCTGAAG GAAGGGCTGA CGGTATTCCG CGATCAGGAG
TTTTCCGCGG ACATGGCGAG CGGCGGCAGT GCCGGCGAGG ATCAGGCTGC GCGCGCAACC
AAGCGCATCG AAGACGTACG CGTGCTGCGT CAGATGCAGT TCGCCGAAGA TGCCGGTCCG
ATGGCGCATC CCGTGCGCCC CGAAAGCTAT GTGGAGATCA ACAACTTCTA CACGATGACG
GTCTACGAGA AGGGCTCGGA AGTCGTGCGG ATGTATCAGA CGTTGTTCGG ACGCGAAGGC
TTCCGCCGCG GCATGGATCT TTACTTCAAG CGCCACGACG GCCAGGCGGT GACCTGCGAC
GACTTCCGTC ACGCGATGGC CGATGCGAAC GGCCGCGATC TCACGCAATA CGAACGCTGG
TACAGCCAGG CGGGCACGCC GCGCATCAGC GTCGACACGC ACTATGACGC CGCGCAGAAG
CGCTACACGG TGAAGCTCAA GCAAGGCTAC GGCGACGCGT CGCAGGCTGC ACGTGACACG
CAGAAAGGCC CGCTGCTGAT TCCGGTTGCG ATCGGCCTGA TCGGCGATGA CGGCAATGAC
ATGCCGCTGC GTCTCGAAGG CGAAGCAGCG GCGTCGCCCC ACAGCACGCG CGTGCTCGAG
TTCACGCAAG CCGAACAGAG CTTTACGTTC GTCGACGTCG CCGAGAAGCC GCTGCCGTCG
CTGCTGCGCA ATTTTTCGGC GCCCGTCGTT GTCGAGTACG ACTACACGGC CGATGAACTC
GCGTTCCTGC TCGCGCACGA CAGCGATCCG TTCAACCGCT GGGAAGCCGG CCAGCGCCTC
GCAACGCGCG AGCTGCTCAC GCTCGCCGAA CACGCAGCAA CGGGCAAGGC ACTGGAACTG
GACGACACGG TGGTCGCCGC CTTCGGCCGC GTGCTGAACG ACGAGACGCT GTCGCCAGCA
TTCCGCGAAC TCACGCTGAT GCTGCCTTCG GAGGCATATC TCGCCGAGCA GATGGAAGAG
TCGAATCCCG CAGCCGTTCA CAGCGCGCGG CAGTTCGTGC GCAAGCGCAT GGCATCGGCG
CTCAAGGGCG ACTGGCTCGC GATCTACGAG CGTCATCAGA CGCCCGGCGC TTATGAGCCG
ACGCCCACGG CGGCCGGACA TCGTGCGCTG AAGAACCTTG CGCTCGCGTA TATCGCCGAA
CTCGATGATC CAACCGACGC CAGGCGCCTC GCGAAGGCGC AGTACGACGC GGCAAACAAC
ATGACGGATC GCGCGTCGGC TTTGTCCGCG CTGCTGACGG CGGGGGTATC GAACGGCGGC
GCGGCGGCGG CCGAGGCGCT CGACGACTTC TATCGCCGCT TCGAAGACGA GCCGCTCGTG
ATTGACAAGT GGTTTGCGCT GCAGGCGATG CAACGCGGCA CGAAGCAGCG GCCCGTCATC
GAGATCGTGC GCACGTTGAT GACGCATCCA GCGTTCAATC TGAAAAACCC GAATCGCGCG
CGCTCGCTGA TCTTCAGCTT CTGCTCGGCG AACCCTGCGC AGTTCCACGC GGAAGACGGC
TCAGGCTATG CGTTCTGGGC CGACCAGGTG ATCGCGCTCG ACGCGCTCAA TCCGCAGGTT
GCCGCACGTC TCGCAAGAGC CCTGGAACTG TGGCGGCGCT TCACGCCCCG GCTGCGCGAC
CAGATGCGCG CGGCACTTGA AAAGGTCGCG GCTCAGGCGA AATCGCGCGA CGTGCGCGAA
ATCGTCGAGA AGGCGCTGGC CTGA
|
|---|
| Protein sequence | MTRSPGALSV VALYTTRRLR AYSRTHIMAD TETPQVIRRA DYAPPAFLID TVALEFDLVP
ERTVVRNTMR IRRNPDAVRA THLDLMGEDL TFVEALLDGK PYADVHPHEH GLTVDNVPDS
FELTLTGICN PAANTTLSGL YVSSGNFFTQ CEAEGFRRIT WFLDRPDVMA TYTVTLRADK
AAYPVLLSNG NLLEQGELPD GRHFARWEDP FRKPSYLFAL VAGKLVALEE RVKSGSGKDK
LLQVWVEPHD LDKTRHAMDS LIHSIRWDEA RFGLELDLDR FMIVAVSDFN MGAMENKGLN
IFNTKYVLAN PETATDTDFS NIEAVVGHEY FHNWTGNRVT CRDWFQLSLK EGLTVFRDQE
FSADMASGGS AGEDQAARAT KRIEDVRVLR QMQFAEDAGP MAHPVRPESY VEINNFYTMT
VYEKGSEVVR MYQTLFGREG FRRGMDLYFK RHDGQAVTCD DFRHAMADAN GRDLTQYERW
YSQAGTPRIS VDTHYDAAQK RYTVKLKQGY GDASQAARDT QKGPLLIPVA IGLIGDDGND
MPLRLEGEAA ASPHSTRVLE FTQAEQSFTF VDVAEKPLPS LLRNFSAPVV VEYDYTADEL
AFLLAHDSDP FNRWEAGQRL ATRELLTLAE HAATGKALEL DDTVVAAFGR VLNDETLSPA
FRELTLMLPS EAYLAEQMEE SNPAAVHSAR QFVRKRMASA LKGDWLAIYE RHQTPGAYEP
TPTAAGHRAL KNLALAYIAE LDDPTDARRL AKAQYDAANN MTDRASALSA LLTAGVSNGG
AAAAEALDDF YRRFEDEPLV IDKWFALQAM QRGTKQRPVI EIVRTLMTHP AFNLKNPNRA
RSLIFSFCSA NPAQFHAEDG SGYAFWADQV IALDALNPQV AARLARALEL WRRFTPRLRD
QMRAALEKVA AQAKSRDVRE IVEKALA
|
|---|
| |