| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0678 |
|---|
| Symbol | |
|---|
| ID | 6242177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 763873 |
|---|
| End bp | 764496 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642592446 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001856914 |
|---|
| Protein GI | 186475444 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.826511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGC ATGCTGCAGC ACGCTCAATG ACCCGTCCGA ATCTCATCGG CGCGCTTGGC
GCGATCCTGC TCTGTTCGAC GCTCGCCTTC GCGCCTGCAC CCGCTCGCGC CGACGGCGAC
GACACGTCGC TCACGAATCT GGTCGCACTC GTTTCCCAGC GGCTCGCACT GGCCGAGCCC
GTTGCGCGCT ACAAGTGGGC GCATCATCAG CCGATCACCG ATACGCCGCG GGAACAGGCG
CTGCTCACCG ACGTCGAGAA GCGTGCCTCG CGCGCGGGCG TCGATCCGGC GTTTGCTCAC
GCGTTCTTCC AGGATCAGAT CGATGCGAGC AAGGATGTGC AGAATGCGCT GTTCGACACA
TGGCGTACGA CCCGGCCGCC CGAGGGTGCA GCGCCCGATC TCGCGACGAG CCTCCGGCCG
CAGCTCGACA AGCTGACGCA ATCGCTGATC CCCGCGCTTG CGCGCGTGCA GCGGCTGCGC
GCGCAGGACG ATTGCCCAAT GCGCGTCGCG CGCAGCATCG ACAACTGGAA GTCCCTCACC
CGCTACGACA ACACCCATAA CGCCGCGCTG ACGCGGGCGC TCGGGCATGT GTGCGAATCG
GGCGGAGTGG GGGCGACGGG TTAG
|
|---|
| Protein sequence | MQPHAAARSM TRPNLIGALG AILLCSTLAF APAPARADGD DTSLTNLVAL VSQRLALAEP
VARYKWAHHQ PITDTPREQA LLTDVEKRAS RAGVDPAFAH AFFQDQIDAS KDVQNALFDT
WRTTRPPEGA APDLATSLRP QLDKLTQSLI PALARVQRLR AQDDCPMRVA RSIDNWKSLT
RYDNTHNAAL TRALGHVCES GGVGATG
|
|---|
| |