Gene Bphy_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0648 
Symbol 
ID6242147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp731005 
End bp734274 
Gene Length3270 bp 
Protein Length1089 aa 
Translation table11 
GC content66% 
IMG OID642592413 
Producthydrophobe/amphiphile efflux-1 (HAE1) family protein 
Protein accessionYP_001856884 
Protein GI186475414 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT CCCACTTCTG CATCGACCGC CCGATCTTCG CCTCGGTCAT CTCGATCGTC 
ATCACGCTCG GCGGCGCGCT GACCATGCTC GCGCTGCCCA CCGCGCAGTA CCCCGACATC
ACCCCGCCGC AGATCACGAT CTCCGCGACC TACCCGGGCG CGAGCGCCGA CGTGGTCGCC
AACAACGTCG CGGCCCCCAT CGAGCAGCAG GTCAACGGCG CCGACAACAT GATCTACATG
AGCTCGTCGA GCTCCTCCAC CGGCAACCTG ACCATCAACG CTTACTTCCA GATCGGCACC
AACCCCGAGC TCGCGCAGGT CGACGTGCAG AACCGCGTGA ACCTCGCGCT GCCGCAACTG
CCGCAGTCGG TCACGAACCA GGGCGTGCAG GTGCAGAAGA AGTCGCAGGC GTTCATGATG
GTGATCGCGA TCTACTCGCC CACCGAGCGC TACGACGCCA CCTACATCGC GAACTACGCG
AACGTCTACG TGCTCGATGC ATTGAAGCGC ATCCCCGGCG CGAACCAGTC GAGCATCTTC
GGCACGCCCG ACTACGCGAT GCGCATCTGG CTGCGCCCCG ACCGCATGGC GCAGCTCGGC
ATCACGGCCG CCGACGTGCA GCGCGCGGTC GCCAACCAGA ACCAGCAGTT CGCCGTCGGG
CGGCTCGGAC AGTCGCCAAC GGGCAACCCC GTCGAGCAGT CGTTCGCCGT CACCACGACG
GGGCGCCTGA CCGAGCCCAC GCAGTTCGAG AACATCATCA TCCGCGCGCA GAGCGGCGGC
GCGGCGATCG TGCGCCTGAA GGACATCGGC CGCGCCGAAC TGGGCCAGAA GGATTATTCG
ATCCGCAGCC GCTTCCAGGG CAAGCCCGCC ACCGTGATCG CCGTCTACCA GCAGCCGGGC
GCCAACGCGC TCGACGTGTC CAAGCAGGTG CGCGCCACGC TCGCCGAGAT GAAGAAGTCC
TTCCCCGAAG GGATCGACTA CGAGATCGCG ATGGACACCA CCGAGTTCAC GCGCGCCTCG
ATCTCGGACG TCGTGCACAC GTTCTTCGAG GCCGTCGTGC TGGTGGTGAT CGTCGTGTTC
GTGTTCCTGC AGAGCCTGCG CGCGACGCTG ATCCCGGTGC TCGCGGTGCC CGTGTCGATC
GTCGGCACCT TCATGGGCAT GGAGGCGCTC GGGTTCTCGA TCAACATGCT CACGCTGTTC
GGCATGGTGC TCGCGATCGG CATCGTGGTC GACGATGCGA TCGTCGTGAT CGAGAACGTC
GAGCGCAACA TGACCGTGCA CAAGCTCGAT CCGAAGACAG CCGCCAAGCA GGCGATGGAC
GAGGTCGCCG GCCCGGTCGT CGCGATCGTG CTGGTGCTGT GCGCGGTGTT CGTGCCCGTG
GCGTTTCTGG GCGGCATCAC CGGGCAGATG TACAAGCAGT TCGCGATCAC GATCGCGATC
TCGGTGGTGA TCTCGGGCGT CGTCGCGCTG ACGCTCTCGC CCGCGCTCGC GGCGCTGCTG
CTCAAGCCCG GGCATCACGA GAAGAAGGGC TTCTTCCGCT GGTTCGACAA CCAGTTCGCG
CGCATGACGG CGGGCTACAC GCGCGCGGTG CGGCTCGTGA TCCGGCGCTT CGTGATCGCG
CTGCTGCTGT TCGTCGGCAT GATCGGGCTC GCCGTGCTGA TGATGCGCGA CATTCCGACG
GCCTTCCTGC CGCCCGAGGA TCAGGGCTAT CTGCTGGGCG CCGTGATCAT GCCCGATGCC
GCCTCGCTCG ACCGCACGGG CAAGGTGTCG GACCGCATCT CCGAATACTT CATGAAGCAG
CCGGCCGTGG GCAGCATCAC GACGGTCGAC GGCTTCAGCA TTCTCGACAG CCAGAACAAG
AACAATTCGT CGACCTTCTT CGTCGGCTTC AGGAGTTTCG AGGAGCGCTA CAGGTCGGCC
AACATCCGCA CGCAGAATGC GCGCGCGGTG CTGGTCGATG CGTACCGGAC GCTGTCGCAG
ATCCGCGAGG GCATCGTCGT GCCGCTCAAT CCGCCGTCCA TTCCGGGCCT CGGCACCACG
GGCGGCACCG AGATGTGGAT CCAGAGCAAG GGCGATGCGA CCATCGCGCA GTTCGCCGCC
GTCGTGAACG ACTTCGTCGC GCGTGCGAAG CAGCGCCCGG AACTCACGGG CGTGACCAAC
ACCTTCAACG CGGACTCGCA GCAGCTGCTG GTCGACGTGG ACCGCGACAA GGCCGAGACG
CTCGGTGTGC CCGTCGAGGA CGTCTACAGC GCGATGCAGA CGATGTTCGG CTCGCTCTAT
GTGTCGCAGT TCAACCGCTC GAGCCGTCTG TGGCAGGTGA TCCTGCAGGC CGAGCCGTCG
TACCGCCTCA AGCCCGACGA TCTCGAGCAG ATCTTCGTGC GCAGCAAGGA CGGCAGCATG
GTGCCGCTCA AGTCGGTGGT GACCTCGCGC TATGTGACGG GGCCGGACCT GATCACGCGC
TTCAACAACT TCCCGGCCGT GAAGATCACG GCCAACGCGG CGCCCGGCTA CGCGTCGGGC
CAGGTGATCA GCGCGCTCGA GGAGCTGGCC GCGTCGATGC CCTCGGACTA CGGCGTCGCG
TGGAGCGGCG AGGCGTTCGA GGCGAAGCAG TCGGGCGGCA CCTCGGGGCT CGTGTTCGTG
TTCGGGCTGA TCATGGTGTT CCTCATCCTG GCCGCGCAGT ACGAGAAGTG GAGCCTGCCG
TTCGGCGTGC TGATGGCGGT GCCGTTCGCG CTGTTCGGGG CGCTGCTCGC GATCCTGCTG
CGCGGGCTGA ACAACGACGT GTACTTCCAG ATCGGTCTGA CGATGCTGGT CGCGCTCGCG
GCGAAGAACG CCATTCTCAT CTTCGAATTC GCGGTGCTCA ACCGGGAGTC GGGCAAGTCG
GTGTTCGACG CGACGATGAC GGCGGCCGAG GAGCGGCTGC GGCCGATCGT GATGACGTCG
CTGGCGTTCA TTCTGGGCTG CGTGCCGCTG GCGATCGCGA CGGGCGCGTC GGCCAACAGC
CGGCATTCGA TCGGCACGGG CGTGATCGGC GGGATGCTGG GGGCGACGGC CATCGCCGTG
TTCTTCATTC CGATGTTCTT CTATGTGCTG GAGACGATGT CGGAGAAAAG CGGCAAGAAG
AAGGACAAGA AGGCGGGGAA CGTGCCGCCT TCCTCGCCGG GGCCGGGTGC GATAGCGGGC
GAGCCGGACA GGGTGCCGCC GTCGGCCGGC GGCCCGGCCG TGGGCGGCGG CCCGAGCACC
CGTCCGTCCG CCCCGCGTGA AGGTGAGTGA
 
Protein sequence
MNISHFCIDR PIFASVISIV ITLGGALTML ALPTAQYPDI TPPQITISAT YPGASADVVA 
NNVAAPIEQQ VNGADNMIYM SSSSSSTGNL TINAYFQIGT NPELAQVDVQ NRVNLALPQL
PQSVTNQGVQ VQKKSQAFMM VIAIYSPTER YDATYIANYA NVYVLDALKR IPGANQSSIF
GTPDYAMRIW LRPDRMAQLG ITAADVQRAV ANQNQQFAVG RLGQSPTGNP VEQSFAVTTT
GRLTEPTQFE NIIIRAQSGG AAIVRLKDIG RAELGQKDYS IRSRFQGKPA TVIAVYQQPG
ANALDVSKQV RATLAEMKKS FPEGIDYEIA MDTTEFTRAS ISDVVHTFFE AVVLVVIVVF
VFLQSLRATL IPVLAVPVSI VGTFMGMEAL GFSINMLTLF GMVLAIGIVV DDAIVVIENV
ERNMTVHKLD PKTAAKQAMD EVAGPVVAIV LVLCAVFVPV AFLGGITGQM YKQFAITIAI
SVVISGVVAL TLSPALAALL LKPGHHEKKG FFRWFDNQFA RMTAGYTRAV RLVIRRFVIA
LLLFVGMIGL AVLMMRDIPT AFLPPEDQGY LLGAVIMPDA ASLDRTGKVS DRISEYFMKQ
PAVGSITTVD GFSILDSQNK NNSSTFFVGF RSFEERYRSA NIRTQNARAV LVDAYRTLSQ
IREGIVVPLN PPSIPGLGTT GGTEMWIQSK GDATIAQFAA VVNDFVARAK QRPELTGVTN
TFNADSQQLL VDVDRDKAET LGVPVEDVYS AMQTMFGSLY VSQFNRSSRL WQVILQAEPS
YRLKPDDLEQ IFVRSKDGSM VPLKSVVTSR YVTGPDLITR FNNFPAVKIT ANAAPGYASG
QVISALEELA ASMPSDYGVA WSGEAFEAKQ SGGTSGLVFV FGLIMVFLIL AAQYEKWSLP
FGVLMAVPFA LFGALLAILL RGLNNDVYFQ IGLTMLVALA AKNAILIFEF AVLNRESGKS
VFDATMTAAE ERLRPIVMTS LAFILGCVPL AIATGASANS RHSIGTGVIG GMLGATAIAV
FFIPMFFYVL ETMSEKSGKK KDKKAGNVPP SSPGPGAIAG EPDRVPPSAG GPAVGGGPST
RPSAPREGE