Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0648 |
Symbol | |
ID | 6242147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 731005 |
End bp | 734274 |
Gene Length | 3270 bp |
Protein Length | 1089 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642592413 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001856884 |
Protein GI | 186475414 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCT CCCACTTCTG CATCGACCGC CCGATCTTCG CCTCGGTCAT CTCGATCGTC ATCACGCTCG GCGGCGCGCT GACCATGCTC GCGCTGCCCA CCGCGCAGTA CCCCGACATC ACCCCGCCGC AGATCACGAT CTCCGCGACC TACCCGGGCG CGAGCGCCGA CGTGGTCGCC AACAACGTCG CGGCCCCCAT CGAGCAGCAG GTCAACGGCG CCGACAACAT GATCTACATG AGCTCGTCGA GCTCCTCCAC CGGCAACCTG ACCATCAACG CTTACTTCCA GATCGGCACC AACCCCGAGC TCGCGCAGGT CGACGTGCAG AACCGCGTGA ACCTCGCGCT GCCGCAACTG CCGCAGTCGG TCACGAACCA GGGCGTGCAG GTGCAGAAGA AGTCGCAGGC GTTCATGATG GTGATCGCGA TCTACTCGCC CACCGAGCGC TACGACGCCA CCTACATCGC GAACTACGCG AACGTCTACG TGCTCGATGC ATTGAAGCGC ATCCCCGGCG CGAACCAGTC GAGCATCTTC GGCACGCCCG ACTACGCGAT GCGCATCTGG CTGCGCCCCG ACCGCATGGC GCAGCTCGGC ATCACGGCCG CCGACGTGCA GCGCGCGGTC GCCAACCAGA ACCAGCAGTT CGCCGTCGGG CGGCTCGGAC AGTCGCCAAC GGGCAACCCC GTCGAGCAGT CGTTCGCCGT CACCACGACG GGGCGCCTGA CCGAGCCCAC GCAGTTCGAG AACATCATCA TCCGCGCGCA GAGCGGCGGC GCGGCGATCG TGCGCCTGAA GGACATCGGC CGCGCCGAAC TGGGCCAGAA GGATTATTCG ATCCGCAGCC GCTTCCAGGG CAAGCCCGCC ACCGTGATCG CCGTCTACCA GCAGCCGGGC GCCAACGCGC TCGACGTGTC CAAGCAGGTG CGCGCCACGC TCGCCGAGAT GAAGAAGTCC TTCCCCGAAG GGATCGACTA CGAGATCGCG ATGGACACCA CCGAGTTCAC GCGCGCCTCG ATCTCGGACG TCGTGCACAC GTTCTTCGAG GCCGTCGTGC TGGTGGTGAT CGTCGTGTTC GTGTTCCTGC AGAGCCTGCG CGCGACGCTG ATCCCGGTGC TCGCGGTGCC CGTGTCGATC GTCGGCACCT TCATGGGCAT GGAGGCGCTC GGGTTCTCGA TCAACATGCT CACGCTGTTC GGCATGGTGC TCGCGATCGG CATCGTGGTC GACGATGCGA TCGTCGTGAT CGAGAACGTC GAGCGCAACA TGACCGTGCA CAAGCTCGAT CCGAAGACAG CCGCCAAGCA GGCGATGGAC GAGGTCGCCG GCCCGGTCGT CGCGATCGTG CTGGTGCTGT GCGCGGTGTT CGTGCCCGTG GCGTTTCTGG GCGGCATCAC CGGGCAGATG TACAAGCAGT TCGCGATCAC GATCGCGATC TCGGTGGTGA TCTCGGGCGT CGTCGCGCTG ACGCTCTCGC CCGCGCTCGC GGCGCTGCTG CTCAAGCCCG GGCATCACGA GAAGAAGGGC TTCTTCCGCT GGTTCGACAA CCAGTTCGCG CGCATGACGG CGGGCTACAC GCGCGCGGTG CGGCTCGTGA TCCGGCGCTT CGTGATCGCG CTGCTGCTGT TCGTCGGCAT GATCGGGCTC GCCGTGCTGA TGATGCGCGA CATTCCGACG GCCTTCCTGC CGCCCGAGGA TCAGGGCTAT CTGCTGGGCG CCGTGATCAT GCCCGATGCC GCCTCGCTCG ACCGCACGGG CAAGGTGTCG GACCGCATCT CCGAATACTT CATGAAGCAG CCGGCCGTGG GCAGCATCAC GACGGTCGAC GGCTTCAGCA TTCTCGACAG CCAGAACAAG AACAATTCGT CGACCTTCTT CGTCGGCTTC AGGAGTTTCG AGGAGCGCTA CAGGTCGGCC AACATCCGCA CGCAGAATGC GCGCGCGGTG CTGGTCGATG CGTACCGGAC GCTGTCGCAG ATCCGCGAGG GCATCGTCGT GCCGCTCAAT CCGCCGTCCA TTCCGGGCCT CGGCACCACG GGCGGCACCG AGATGTGGAT CCAGAGCAAG GGCGATGCGA CCATCGCGCA GTTCGCCGCC GTCGTGAACG ACTTCGTCGC GCGTGCGAAG CAGCGCCCGG AACTCACGGG CGTGACCAAC ACCTTCAACG CGGACTCGCA GCAGCTGCTG GTCGACGTGG ACCGCGACAA GGCCGAGACG CTCGGTGTGC CCGTCGAGGA CGTCTACAGC GCGATGCAGA CGATGTTCGG CTCGCTCTAT GTGTCGCAGT TCAACCGCTC GAGCCGTCTG TGGCAGGTGA TCCTGCAGGC CGAGCCGTCG TACCGCCTCA AGCCCGACGA TCTCGAGCAG ATCTTCGTGC GCAGCAAGGA CGGCAGCATG GTGCCGCTCA AGTCGGTGGT GACCTCGCGC TATGTGACGG GGCCGGACCT GATCACGCGC TTCAACAACT TCCCGGCCGT GAAGATCACG GCCAACGCGG CGCCCGGCTA CGCGTCGGGC CAGGTGATCA GCGCGCTCGA GGAGCTGGCC GCGTCGATGC CCTCGGACTA CGGCGTCGCG TGGAGCGGCG AGGCGTTCGA GGCGAAGCAG TCGGGCGGCA CCTCGGGGCT CGTGTTCGTG TTCGGGCTGA TCATGGTGTT CCTCATCCTG GCCGCGCAGT ACGAGAAGTG GAGCCTGCCG TTCGGCGTGC TGATGGCGGT GCCGTTCGCG CTGTTCGGGG CGCTGCTCGC GATCCTGCTG CGCGGGCTGA ACAACGACGT GTACTTCCAG ATCGGTCTGA CGATGCTGGT CGCGCTCGCG GCGAAGAACG CCATTCTCAT CTTCGAATTC GCGGTGCTCA ACCGGGAGTC GGGCAAGTCG GTGTTCGACG CGACGATGAC GGCGGCCGAG GAGCGGCTGC GGCCGATCGT GATGACGTCG CTGGCGTTCA TTCTGGGCTG CGTGCCGCTG GCGATCGCGA CGGGCGCGTC GGCCAACAGC CGGCATTCGA TCGGCACGGG CGTGATCGGC GGGATGCTGG GGGCGACGGC CATCGCCGTG TTCTTCATTC CGATGTTCTT CTATGTGCTG GAGACGATGT CGGAGAAAAG CGGCAAGAAG AAGGACAAGA AGGCGGGGAA CGTGCCGCCT TCCTCGCCGG GGCCGGGTGC GATAGCGGGC GAGCCGGACA GGGTGCCGCC GTCGGCCGGC GGCCCGGCCG TGGGCGGCGG CCCGAGCACC CGTCCGTCCG CCCCGCGTGA AGGTGAGTGA
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Protein sequence | MNISHFCIDR PIFASVISIV ITLGGALTML ALPTAQYPDI TPPQITISAT YPGASADVVA NNVAAPIEQQ VNGADNMIYM SSSSSSTGNL TINAYFQIGT NPELAQVDVQ NRVNLALPQL PQSVTNQGVQ VQKKSQAFMM VIAIYSPTER YDATYIANYA NVYVLDALKR IPGANQSSIF GTPDYAMRIW LRPDRMAQLG ITAADVQRAV ANQNQQFAVG RLGQSPTGNP VEQSFAVTTT GRLTEPTQFE NIIIRAQSGG AAIVRLKDIG RAELGQKDYS IRSRFQGKPA TVIAVYQQPG ANALDVSKQV RATLAEMKKS FPEGIDYEIA MDTTEFTRAS ISDVVHTFFE AVVLVVIVVF VFLQSLRATL IPVLAVPVSI VGTFMGMEAL GFSINMLTLF GMVLAIGIVV DDAIVVIENV ERNMTVHKLD PKTAAKQAMD EVAGPVVAIV LVLCAVFVPV AFLGGITGQM YKQFAITIAI SVVISGVVAL TLSPALAALL LKPGHHEKKG FFRWFDNQFA RMTAGYTRAV RLVIRRFVIA LLLFVGMIGL AVLMMRDIPT AFLPPEDQGY LLGAVIMPDA ASLDRTGKVS DRISEYFMKQ PAVGSITTVD GFSILDSQNK NNSSTFFVGF RSFEERYRSA NIRTQNARAV LVDAYRTLSQ IREGIVVPLN PPSIPGLGTT GGTEMWIQSK GDATIAQFAA VVNDFVARAK QRPELTGVTN TFNADSQQLL VDVDRDKAET LGVPVEDVYS AMQTMFGSLY VSQFNRSSRL WQVILQAEPS YRLKPDDLEQ IFVRSKDGSM VPLKSVVTSR YVTGPDLITR FNNFPAVKIT ANAAPGYASG QVISALEELA ASMPSDYGVA WSGEAFEAKQ SGGTSGLVFV FGLIMVFLIL AAQYEKWSLP FGVLMAVPFA LFGALLAILL RGLNNDVYFQ IGLTMLVALA AKNAILIFEF AVLNRESGKS VFDATMTAAE ERLRPIVMTS LAFILGCVPL AIATGASANS RHSIGTGVIG GMLGATAIAV FFIPMFFYVL ETMSEKSGKK KDKKAGNVPP SSPGPGAIAG EPDRVPPSAG GPAVGGGPST RPSAPREGE
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