Gene Bphy_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0642 
Symbol 
ID6242141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp724326 
End bp725624 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content62% 
IMG OID642592406 
Productseryl-tRNA synthetase 
Protein accessionYP_001856878 
Protein GI186475408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.586932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACA TCCAGTTGCT GCGCAAAGAC ATCGACGGCG TCGCGAAGCG CCTCGCCGAT 
CGCGGCTATA TCCTCGACGT CGCGGCTTTC TCCGCGCTCG AAGCCGAACG CCGCGCCATC
CAGACCCGTA CCGAAGAGCT GCAGGCAAAG CGCAACAGCC TGTCGAAGCA GATCGGTGCG
ATGAAAGGGC GGGGCGAAGA CACGTCCGCG GTGATGGCCG AGGTGGGCGG TATCGGCGAC
GAGATGAAGG CGTCGGCAGT GCAACTCGAA GACATCCAGA AGCGCCTGTC GGATCTGCTG
CTCGGCGTGC CGAACCTTGC GCACGAAAGC GTGCCCGTCG GCAACGACGA GGCCGGCAAC
GTCGAAGTCC GCCGCTGGGG AACGCCGCGC CAGTTCGACT TCGAGATCAA GGATCACGTC
GACGTCGGCA CGCCGCTCGG GCTCGATTTC GAAACGGGCG CGAAGCTGTC GGGCGCGCGC
TTCACGCTGC TGCGTGGACA GATTGCGCGT CTGCACCGCG CGCTTGCGCA GTTCATGATC
GACACGCACA CGCAGCAGCA CGGCTACACG GAAGTCTATA CACCGTATAT CGTCAATCCC
GAAATCCTGT TCGGCACGGG CCAACTGCCC AAGTTCGCCG ACGACATGTT CCGCGTCGAA
AAGGGCGGCG GCGAAAACAC GGTGACGCAA TACCTGATCT CGACGTCGGA GATTTCGCTG
ACTAACACGG TGCGCGACAG CATCGTCGAC TCGAACGAAT TGCCCATCAA GCTGACGGCT
CATTCGCCGT GCTTTCGCTC GGAAGCGGGC TCGTACGGTC GCGACACCCG CGGCATGATC
CGTCAGCATC AGTTCGACAA GGTCGAGATG GTGCAGATCG TGTCGCCCGA CACGTCATAC
GACGCGCTCG AGCAGATGGT CGCGCACGCG GAAGTGATCT TGCAGAAGCT CGAACTGCCG
TATCGTGTCA TCACGCTGTG CACCGGCGAT ATGGGCTTTT CGGCAGCGAA AACGTATGAC
CTAGAAGTGT GGGTGCCTGC GCAGAATACC TATCGCGAGA TCTCGAGCTG TTCGAACACG
GAAGCGTTCC AGGCGCGCCG GATGCAAGCG CGCTTCCGCA ACGCGCAGGG CAAGCCCGAA
CTCGTTCATA CGCTGAACGG TTCGGGCCTC GCTGTCGGCC GTACACTTGT CGCCGTGCTG
GAGAATTTCC AGAACGCCGA TGGCTCGGTG ACGGTTCCGG CCGCGCTGCG CCCGTATCTC
GGTGGCGTCG ATCGACTTGA AGTGAAGGCG TCTGCCTGA
 
Protein sequence
MLDIQLLRKD IDGVAKRLAD RGYILDVAAF SALEAERRAI QTRTEELQAK RNSLSKQIGA 
MKGRGEDTSA VMAEVGGIGD EMKASAVQLE DIQKRLSDLL LGVPNLAHES VPVGNDEAGN
VEVRRWGTPR QFDFEIKDHV DVGTPLGLDF ETGAKLSGAR FTLLRGQIAR LHRALAQFMI
DTHTQQHGYT EVYTPYIVNP EILFGTGQLP KFADDMFRVE KGGGENTVTQ YLISTSEISL
TNTVRDSIVD SNELPIKLTA HSPCFRSEAG SYGRDTRGMI RQHQFDKVEM VQIVSPDTSY
DALEQMVAHA EVILQKLELP YRVITLCTGD MGFSAAKTYD LEVWVPAQNT YREISSCSNT
EAFQARRMQA RFRNAQGKPE LVHTLNGSGL AVGRTLVAVL ENFQNADGSV TVPAALRPYL
GGVDRLEVKA SA