Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0628 |
Symbol | |
ID | 6242127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 706586 |
End bp | 707833 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642592392 |
Product | extracellular solute-binding protein |
Protein accession | YP_001856864 |
Protein GI | 186475394 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.224261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCC GTGCGATCAT GGGCGCCCTG TGCGCCGCAG GTCTGATGTG TGGCGTCGCC ACGGCACAGG CGGCCGAATC TGTCGAAGTG CTGCACTGGT GGACGTCGGG CGGCGAGTCG AAGGCCGTCG GCGTGCTGAA AGACGACCTG CAGAAGCAGG GTTACACGTG GAAGGACTTC GCGGTGGCAG GCGGCGCGGG CGCAGCGGCC ATGACGGCAC TGAAGACCCA GGTGATCTCG GGCAACGCGC CGAGCGCGGC TCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCATCGCAA GGCGTGCTGG TGAACATCGA TTCCGTCGCT GGCGACTGGA AGAAGAACCT GCCGCCCGAA ATCGACAAGA TCATGCATGC AGACGGCCAC TATGTCGCGG CGCCGTTCTC GGTGCACCGC GTCAACTGGC TGTACATCAA CAAGGCTGCG CTCGACAAGG CAGGCGGCAA GGTGCCGACC ACGTGGCCCG AGTTCTTCGC TGTCGCCGAC AAGATGAAGG CAGCGGGCAT CCAGCCGATC GCGATGGGCG GCCAGCCGTG GCAAGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAA GGCGCGGACT TCTACAAGAA GGCGCTGGTC GACCTCGACC AGAAAACGCT GACGTCGGAC AAGATGCTTG GCGTGTTCGA CACGGTCCGC AAGATCCAGG GGTACTTCGA CAGCGGCCGC ACGGGTCGCG ACTGGAACCT GGCGACGGCA ATGGTCATCA ACGGCAAGGC CGGCATGCAG TTCATGGGTG ACTGGGCGAA GGGCGAGTTC GCGAACGCGA ACAAGAAGTC CGGCTCGGAC TACATCTGCG CGGCCGTTCC GGGTACGGAA AAGTCGTACA CGTTCAATGT GGACTCGTTC GTGTTCTTCC AGCAGAAGGG TCAAAAGGCC GCAACGCCGG GCCAGCTGGC GCTCGCGAAG ACCATCATGA GCCCGGAATT CCAGGAGCAG TTCAGCCTGT ACAAGGGTTC GATTCCCGTT CGTCTCGGCG TGTCGATGGA TAAATTCGAC GACTGCGCGA AGAAGTCCTA CGCTGATGAA CAGGTGGCCA TCAAGTCGGG CGGCTATGTG CCGTCGCTGG CTCACGGCAT GGCTCAGCCG GACGCAGCGG CGGGCGCTAT CTCGGACGTC GTGACGAAGT TCATGAACTC GAATCAGGAC TCCAAGAGCG CAGTTGCCGC TCTCGCGAAG GCTGCGAAGA CGAAGTAA
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Protein sequence | MKFRAIMGAL CAAGLMCGVA TAQAAESVEV LHWWTSGGES KAVGVLKDDL QKQGYTWKDF AVAGGAGAAA MTALKTQVIS GNAPSAAQIK GPLIQDWASQ GVLVNIDSVA GDWKKNLPPE IDKIMHADGH YVAAPFSVHR VNWLYINKAA LDKAGGKVPT TWPEFFAVAD KMKAAGIQPI AMGGQPWQDL TLWEDVVLSQ GADFYKKALV DLDQKTLTSD KMLGVFDTVR KIQGYFDSGR TGRDWNLATA MVINGKAGMQ FMGDWAKGEF ANANKKSGSD YICAAVPGTE KSYTFNVDSF VFFQQKGQKA ATPGQLALAK TIMSPEFQEQ FSLYKGSIPV RLGVSMDKFD DCAKKSYADE QVAIKSGGYV PSLAHGMAQP DAAAGAISDV VTKFMNSNQD SKSAVAALAK AAKTK
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