Gene Bphy_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0628 
Symbol 
ID6242127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp706586 
End bp707833 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content62% 
IMG OID642592392 
Productextracellular solute-binding protein 
Protein accessionYP_001856864 
Protein GI186475394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.224261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC GTGCGATCAT GGGCGCCCTG TGCGCCGCAG GTCTGATGTG TGGCGTCGCC 
ACGGCACAGG CGGCCGAATC TGTCGAAGTG CTGCACTGGT GGACGTCGGG CGGCGAGTCG
AAGGCCGTCG GCGTGCTGAA AGACGACCTG CAGAAGCAGG GTTACACGTG GAAGGACTTC
GCGGTGGCAG GCGGCGCGGG CGCAGCGGCC ATGACGGCAC TGAAGACCCA GGTGATCTCG
GGCAACGCGC CGAGCGCGGC TCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCATCGCAA
GGCGTGCTGG TGAACATCGA TTCCGTCGCT GGCGACTGGA AGAAGAACCT GCCGCCCGAA
ATCGACAAGA TCATGCATGC AGACGGCCAC TATGTCGCGG CGCCGTTCTC GGTGCACCGC
GTCAACTGGC TGTACATCAA CAAGGCTGCG CTCGACAAGG CAGGCGGCAA GGTGCCGACC
ACGTGGCCCG AGTTCTTCGC TGTCGCCGAC AAGATGAAGG CAGCGGGCAT CCAGCCGATC
GCGATGGGCG GCCAGCCGTG GCAAGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAA
GGCGCGGACT TCTACAAGAA GGCGCTGGTC GACCTCGACC AGAAAACGCT GACGTCGGAC
AAGATGCTTG GCGTGTTCGA CACGGTCCGC AAGATCCAGG GGTACTTCGA CAGCGGCCGC
ACGGGTCGCG ACTGGAACCT GGCGACGGCA ATGGTCATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGTG ACTGGGCGAA GGGCGAGTTC GCGAACGCGA ACAAGAAGTC CGGCTCGGAC
TACATCTGCG CGGCCGTTCC GGGTACGGAA AAGTCGTACA CGTTCAATGT GGACTCGTTC
GTGTTCTTCC AGCAGAAGGG TCAAAAGGCC GCAACGCCGG GCCAGCTGGC GCTCGCGAAG
ACCATCATGA GCCCGGAATT CCAGGAGCAG TTCAGCCTGT ACAAGGGTTC GATTCCCGTT
CGTCTCGGCG TGTCGATGGA TAAATTCGAC GACTGCGCGA AGAAGTCCTA CGCTGATGAA
CAGGTGGCCA TCAAGTCGGG CGGCTATGTG CCGTCGCTGG CTCACGGCAT GGCTCAGCCG
GACGCAGCGG CGGGCGCTAT CTCGGACGTC GTGACGAAGT TCATGAACTC GAATCAGGAC
TCCAAGAGCG CAGTTGCCGC TCTCGCGAAG GCTGCGAAGA CGAAGTAA
 
Protein sequence
MKFRAIMGAL CAAGLMCGVA TAQAAESVEV LHWWTSGGES KAVGVLKDDL QKQGYTWKDF 
AVAGGAGAAA MTALKTQVIS GNAPSAAQIK GPLIQDWASQ GVLVNIDSVA GDWKKNLPPE
IDKIMHADGH YVAAPFSVHR VNWLYINKAA LDKAGGKVPT TWPEFFAVAD KMKAAGIQPI
AMGGQPWQDL TLWEDVVLSQ GADFYKKALV DLDQKTLTSD KMLGVFDTVR KIQGYFDSGR
TGRDWNLATA MVINGKAGMQ FMGDWAKGEF ANANKKSGSD YICAAVPGTE KSYTFNVDSF
VFFQQKGQKA ATPGQLALAK TIMSPEFQEQ FSLYKGSIPV RLGVSMDKFD DCAKKSYADE
QVAIKSGGYV PSLAHGMAQP DAAAGAISDV VTKFMNSNQD SKSAVAALAK AAKTK