| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0621 |
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| Symbol | |
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| ID | 6242120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 696986 |
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| End bp | 698107 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642592385 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001856857 |
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| Protein GI | 186475387 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGC AGACCGATTT CGTCCACATG GAGCGCGCGC TGGCCCTCGC CTGGCGCGGC
CTGTACACGA CTGACCCCAA TCCGCGCGTC GGTTGCGTGC TGGTGAAGAA CGGCGAGGTG
ATCGGCGAAG GCTTCACGCA GCCGGCCGGT CGCGACCACG CGGAAATCCA GGCGCTCAAG
GATGCACGCA AGCGCGGCCA CGATCTTCAA GGCGCGACGG CTTACGTGAC GCTTGAGCCG
TGCAGCCATT TCGGCCGCAC GCCCCCGTGC GCGAATGCAC TCATCGAAGC AAAGCTCGCA
CGCGTGGTCG CCGCGATGGA AGACCCGAAT CCGCGGGTGT CGGGGCGTGG CCTGTCTATG
CTGCGCGAAG CAGGCATCGA AGTGCGTTGC GGCCTGCTCG AAAACGACGC GCGCGAGCTG
AACATCGGCT TCGTGTCGCG GATGACGCGC GGCCGGCCGT GGGTGCGGAT GAAAGTGGCG
GCCTCGCTGG ATGGCCGCAC GGGACTGCCG TCGGGCGAAA GCCAGTGGAT CACCAGCGAA
GCGGCGCGCA ACGACGGACA TGCGTGGCGC GCCCGCGCGT CGGCGATCCT GACGGGCATC
GGCACCGTGA AAGAAGACAA CCCGCGCATG ACGGTGCGCG CAGTCGATAC GCCGCGCCAG
CCGCATCGGG TGCTGATCGA CAGCCAGCTC GAAGTGCCGC CCGACGCGCA GATTCTCGCA
GGCGCGCCCA CGCTGGTCTT CTGCAGCACG CTCTCGCCGC TGCTCACGGA GCGCGCCGCC
GTGCTGCACG ATCGAGGCGC CGAGATCGTG CCGCTCGCGA ACGAGAACGG CAAGGTCGAC
CTGCCGCGCA TGCTCGAAGA ACTCGGCAAG CGCGAAGTCA ACGAATTGCA CGTCGAAGCG
GGTTACAAGC TGAACGGGTC GCTCCTGCGC GAAGGATGCG TCGACGAACT GCTCGTCTAT
GTCGCGCCGA GCCTGCTCGG CAACGACTCG ATGAGCATGT TCAATCTTGC CGCGCCCGGT
TCGCTGGACG CGCGCACACA ACTCGAATTT CATGCCGTGG ACCGGATCGG CAGCGACGTG
CGGATTCTCG CGCGCGTGAT GCCCAAGGTG CCCACGCATT GA
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| Protein sequence | MFSQTDFVHM ERALALAWRG LYTTDPNPRV GCVLVKNGEV IGEGFTQPAG RDHAEIQALK
DARKRGHDLQ GATAYVTLEP CSHFGRTPPC ANALIEAKLA RVVAAMEDPN PRVSGRGLSM
LREAGIEVRC GLLENDAREL NIGFVSRMTR GRPWVRMKVA ASLDGRTGLP SGESQWITSE
AARNDGHAWR ARASAILTGI GTVKEDNPRM TVRAVDTPRQ PHRVLIDSQL EVPPDAQILA
GAPTLVFCST LSPLLTERAA VLHDRGAEIV PLANENGKVD LPRMLEELGK REVNELHVEA
GYKLNGSLLR EGCVDELLVY VAPSLLGNDS MSMFNLAAPG SLDARTQLEF HAVDRIGSDV
RILARVMPKV PTH
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