| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0565 |
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| Symbol | |
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| ID | 6242066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 639716 |
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| End bp | 640972 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642592329 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001856803 |
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| Protein GI | 186475333 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000686773 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000103322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGTATC AGCACATCAC GGTTCCCGCT GACGGTGACA AGATCACTGT CAACGCGGAT
TTCTCGCTCA ACGTTTCCGA TCAGCCGATC ATTCCTTACA TCGAAGGTGA CGGTACGGGT
GTCGACATCA CGCCTGTGAT GATCAAGGTT GTCGATGCAG CCGTTGAGAA GGCATACGGC
GGCAAGAAGA AAATCCACTG GATGGAAATC TTCGCGGGCG AGAAGGCGAC CCGGGTGTAC
GGTCCCGACG TGTGGTTGCC GGATGAGACG CTGGAAGTCG TGAAGGAATA CATCGTGTCG
ATCAAGGGGC CGCTCACGAC GCCAGTCGGC GGCGGCATCC GCTCGCTGAA CGTCACGCTG
CGCCAGGAGC TGGACCTTTA CGTGTGCCTG CGTCCCGTGC AGTATTTCAA GGGCGTGCCG
TCGCCGCTGC GCGAGCCGGA GAAGGTCAAC ATGGTGATCT TCCGTGAGAA CTCGGAAGAC
ATCTACGCCG GCATTGAATG GCCGGCGGGT TCACCTGAAG CGAAGAAGGT CATCCAGTTC
CTGCGCGACG AAATGGGCGT GAAGAAGATC CGCTTTCCGG ACTCGTCGGG TATCGGCGTG
AAGCCGGTGT CGCGCGAAGG CACGGAGCGT CTGGTGCGCA AGGCGATTCA GTACGCGCTC
GACAACGATC GACGCACGGT CACGCTTGTG CACAAGGGCA ACATCATGAA GTACACGGAA
GGCGCGTTCC GTGACTACGG TTATGCACTC GCGCAGAAGG AGTTCAACGC GGAGCTGATC
GACGGCGGTC CGTGGATGAA GGTGAAGAAT CCGAAGACGG GCAACGACGT CGTCGTGAAG
GACGTGATCG CCGATGCGTT CCTGCAGCAG ATCCTGTTGC GTCCCGCCGA ATACGATGTG
ATCGCGACGC TGAACCTGAA CGGCGACTAC ATATCCGACG CACTCGCTGC GCAGGTCGGC
GGCATCGGCA TCGCGCCGGG CGCGAACATG TCGGACTCCG TTGCGATGTT CGAAGCAACG
CACGGTACCG CACCGAAGTA CGCAGGCAAG GATTATGTGA ATCCGGGTTC GGAGATCCTC
TCGGCGGAAA TGATGCTGCG GCACCTCGGC TGGACGGATG CAGCCGATAG GATTCTGGCC
TCGATGGAAA AGTCGATCCT GTCGAAGCGC GTCACGTACG ACTTCGCACG TCTGATGGAA
GGCGCAACAC AGGTGTCGTG CTCGGGCTTC GGGCAGGTGA TGATCGAGAA TATGTGA
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| Protein sequence | MAYQHITVPA DGDKITVNAD FSLNVSDQPI IPYIEGDGTG VDITPVMIKV VDAAVEKAYG
GKKKIHWMEI FAGEKATRVY GPDVWLPDET LEVVKEYIVS IKGPLTTPVG GGIRSLNVTL
RQELDLYVCL RPVQYFKGVP SPLREPEKVN MVIFRENSED IYAGIEWPAG SPEAKKVIQF
LRDEMGVKKI RFPDSSGIGV KPVSREGTER LVRKAIQYAL DNDRRTVTLV HKGNIMKYTE
GAFRDYGYAL AQKEFNAELI DGGPWMKVKN PKTGNDVVVK DVIADAFLQQ ILLRPAEYDV
IATLNLNGDY ISDALAAQVG GIGIAPGANM SDSVAMFEAT HGTAPKYAGK DYVNPGSEIL
SAEMMLRHLG WTDAADRILA SMEKSILSKR VTYDFARLME GATQVSCSGF GQVMIENM
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