| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0564 |
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| Symbol | |
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| ID | 6242065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 638815 |
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| End bp | 639384 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642592328 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001856802 |
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| Protein GI | 186475332 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00757651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000739028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTCTGC TCGCACTCAA CAAGCCCTTC GGCACGATCT GCCAGTTTTC GCCGCACGAA
ACGCGCGCGT CGCTGGCCGA CTGGGTGAAG GTGCCCGGCG TCTATCCTGC GGGCCGACTC
GACTCGGATA GCGAAGGTCT GCTGCTGCTC ACCGACGATG GCACGCTGCA GGCGCGCATC
GCGGAACCCC GGCACAAGCT GGTGAAACGG TATTGGGCAC AAGTCGAAGG CGCACCCACG
GAACAGCATC TGGAGGCGCT CGCGCGTGGC GTCGATCTCG GCGATTACGT CACGCGTCCC
TGTCGCGCCG GGTTCGTCGA ACCGGGGCAA GCGCTATGGG ATCGCACGCC GCCCATTCGA
TATCGCGCGG CGATTCCCAC GACATGGATC GAACTGTCGA TCACCGAAGG CAAGAACCGC
CAGGTGCGCC GCATGACGGC GGCCGTCGGC TTTCCGACGC TGCGTCTCGT GCGTGTCGGC
GTTGGCGCGC TCGATATTTT TTCCCTTGGG CTGCAGCCGG GCGAGAGCAT CGGACTATCA
CCACGCGCGC CGTGGGATGG CGTCACGTAG
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| Protein sequence | MTLLALNKPF GTICQFSPHE TRASLADWVK VPGVYPAGRL DSDSEGLLLL TDDGTLQARI
AEPRHKLVKR YWAQVEGAPT EQHLEALARG VDLGDYVTRP CRAGFVEPGQ ALWDRTPPIR
YRAAIPTTWI ELSITEGKNR QVRRMTAAVG FPTLRLVRVG VGALDIFSLG LQPGESIGLS
PRAPWDGVT
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