| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0558 |
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| Symbol | |
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| ID | 6242059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 631460 |
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| End bp | 633145 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592322 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001856796 |
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| Protein GI | 186475326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.760139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00152331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAATT CCGCGGACCC GCGTTTTGCG CCTCGCCTGG CAGGATCAGT TGACCTGGAG
GCGGCGCGCG TCGGCGCCGA CGCTCACGGT AACCACGCCA TCGACGAGTT CCTCGCTGGC
CGTCTCACGC GGCGCGAACT GCTGCGCTAC GCCAGCGTGA TCGGGATGTC GCTCGCGGGC
GGCAGCCTGC TCGCGCCGCG CAGCGCGCGC GCCCAGGGCG CGGCGGGCGC CAACGCGACG
ATCCGCGTCG CGCATCTGAC GCCCGCAGGC GCCGTCGATC CGATGACGGT CACCGATGCC
GCCAGTCTCT GCCTGCTCAA TCAGACGGGC GAATTCCTGA TTGACGACGA CGGCGAAAAG
CAGACGCTCA AGCCCGCGCT CGCGCTGTCG TGGAAGCCGA ACGACAAGGG CGACGTGTGG
ACGTTCAAGC TGCGCGAGAA CGTGAAATTC CACGACGGTC AGACCTTCAC CGCGAAGGAC
GTCGCGGCGA CTTTCGACCG GCTCGCCGAT CCCGCCGCCG GCTCCGCTGC CCTGTCGACC
TTGAAGGGGG TGCTGTCGAA GGGCAACACG AAAGTCGTCG ACGATCACAC TGTCGCGTTC
CATCTCGACG CGCCCAACGG CAACTTCCCG TACTACGTCT CGTCGGACAA CTACAACGCG
GTCATCCTGC CCGCGAATTA CGCGGGCAAC TACGAGAAGA CCTTCATCGG CACGGGTCCG
TTCAAGCTCG AGAAGTATCA GGCGAAAGTG GGCGCGTCGT TCGTGCGCAA TCCCGACTAC
TGGGGCGACA AGGCCTTGCC GCAGCGCGTG CAGTTCACCT TCTATGCGGA CCAGCAGGCG
CAGATTCTCG CGCTGCAAGG CCATCAGGCC GACGTGATGG GCACCTTCAC CGTACAGGGC
GGTCAAGGTT TGATGAACAA CCCGGAATTC AAGGTGATCG GCGTGAAGTC GAGCGCGCAT
CGGCAGATAC ACATGCGCGT CGACAGCCCG CAATTCAAGG ACAAGCGCGT GCGCCAGGCG
CTTGCGCTGT CGCTCGATCG CGAGGTCATC GTCAAGGGTC TCTTCAAGGG CCGTGCTCAG
GTCGGCAACG ACAGCCCGTT CGCGCCCGCG TTTCCGTCGT CCGATGCAGG CGTGGCGCAG
CGCAAGATCG ATGTCGCGAA GGCGAAGCAG CTGCTCGCGC AGGCGGGCGT GCCGAACGGC
TTCGACGCGA CGCTCACGAC CGAAAAATAC ATGGAGATTC CCGACCTCGC CGTCGTCGTG
CAGAACTATG CGAAGGCGGT TGGCATCCGC ATCAACCTGA AGGTCGAAAG CCAGTCGCAA
TACTACGGCT CGGGCACGCC GGGCAAATCG GACTGGCTCG ATTCGCCGCT CGGCATCACC
GACTACGGCA GCCGTGGCGT GCCCAATGTG TTCCTGAGCG CGCCGTTGAC GAGCGGCGGC
ACGTGGAACG CGGCACACTT CAAGAACCCG CAGTACGACA AGCTGGTTGC AGACTACGTC
GCGGCGCTCG ATATCGCCGG GCAGAAGAAA GTCTCCGCGC AGATCCAGAC GCTGCTGCTC
GACGAAACGC CCGTGATCTT CCCGTTCTTC TACGATCAGC TGATCGCCGC GCGCAAGCAG
TTGAACGGCG TGCGCTTCAC GGCGATCGCG CAGCTGTATT TCGATCGCGC GACGCTCGCG
GGCTGA
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| Protein sequence | MKNSADPRFA PRLAGSVDLE AARVGADAHG NHAIDEFLAG RLTRRELLRY ASVIGMSLAG
GSLLAPRSAR AQGAAGANAT IRVAHLTPAG AVDPMTVTDA ASLCLLNQTG EFLIDDDGEK
QTLKPALALS WKPNDKGDVW TFKLRENVKF HDGQTFTAKD VAATFDRLAD PAAGSAALST
LKGVLSKGNT KVVDDHTVAF HLDAPNGNFP YYVSSDNYNA VILPANYAGN YEKTFIGTGP
FKLEKYQAKV GASFVRNPDY WGDKALPQRV QFTFYADQQA QILALQGHQA DVMGTFTVQG
GQGLMNNPEF KVIGVKSSAH RQIHMRVDSP QFKDKRVRQA LALSLDREVI VKGLFKGRAQ
VGNDSPFAPA FPSSDAGVAQ RKIDVAKAKQ LLAQAGVPNG FDATLTTEKY MEIPDLAVVV
QNYAKAVGIR INLKVESQSQ YYGSGTPGKS DWLDSPLGIT DYGSRGVPNV FLSAPLTSGG
TWNAAHFKNP QYDKLVADYV AALDIAGQKK VSAQIQTLLL DETPVIFPFF YDQLIAARKQ
LNGVRFTAIA QLYFDRATLA G
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