| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0555 |
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| Symbol | |
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| ID | 6242056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 627422 |
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| End bp | 629527 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642592319 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001856793 |
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| Protein GI | 186475323 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0332392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCC CATCGCCTCC GCCGCCGCCC GCGTCGTTTC CCGCCTTCGA CGTATCGAAG
AGCGAGCAGT CGGACGCGCT CACCATCGTC GGACTCACGG TTGCGTATCG CACGCGCGGA
CGCGAGCGCG ACGTGCTGCA GGACGTGTCG TTTCGCATCA GGCGCGGCGA ATCCTATGGT
CTCGTCGGCG AATCGGGCTG CGGCAAATCG ACGGTCGCGA TGGCGACGCT GCGCTATCTG
GCACGCAACG GCCGCGTGAA GGCCGGCCGC GTTTCGATCG CGGGCAAGGA CGTGAATGCG
CTCGATGCGG CCGCGTTGCG AGCGCTGCGG GCGAACAGCA TATCGATGGT GTATCAGGAT
CCGTCGCGCG CGCTCAATCC GTCGCTAACG GTCGCGCGCC AGGTCGCCGA AGCATTCGAG
GCAGCGGGCG CCGTGCACGA AGCCGCGCTG CGACAAACGG TCGAGATCCT GCGCAAGGTG
CGCATCGCCG AACCCGAACG CGTGATGGAC AGTTATCCGC ATCAGCTGTC GGGCGGGATG
CAGCAGCGCG TCGTGATCGC GATGGCGCTC GCGTCCAAAC CCGCGCTGCT GATTCTCGAC
GAGCCGACCA CCGGGCTCGA CGCGACCGTG GAAGCCGAAG TGCTCGATCT CGTTGCGCAA
CTTCGCGAGG AGTTCCACAC GGCCGTGCTC TTCATCAGCC ACAACCTCGC GGTGATCGGC
AGGATGTGCG AGCGCGTCGG CGTGCTGTAT GCAGGCAAGC TCGTCGAAGA AGGCGCGACG
CAGGATGTGT TCGGCCGGCC CAGGCATCCG TACACGGTCG GCCTGCTGCG CTGTCTGCCG
ACGGTAGGCC GGAGCAAGGA CACCGACCGG CTCGACACGA TCGCGGGCAG CCTGCCGCAG
CCGGGTTCCG TCACGCAGGG TTGCGTGTAT CTGGAACGCT GCCGTCTCGC CGACGACCGC
TGCCGGCGCG AAGCGCCGCC CCCGTACCGC GTGAGTGCGC AGCACGGCGA TCAGATGTCG
CGTTGCCACT ATCACGAACG TGCCGTCGAG TTGCCGCGCG TGACGCCTGT CGCGCCGCCG
GCAAACGGGC GCATTGCGTA CGACGCGTCG CCCGTGCTGC GCGCGCAGAA CGTGTCGAAG
ACTTTTCATG TCAATGGCTC TGCGCTGCGC GCCGTCGACG ATGTCTCGCT CGAAGTCGCG
AAGGGCGAGA CGCTCGGTCT CGTCGGCGAA TCGGGCAGCG GCAAGACGAC GCTCGCGAAG
CTGCTGCTCG GCCTCGTGTC GCCCGACGCA GGCAGCGTGC TGGAACTCGA CGGCGCGCCG
CTGCCGCCGC GCGTCACGCA TCGCAACGAC GATCAGGTGA AGTCGCTGCA GATCGTGTTC
CAGAACCCCG ACTCGGCGCT CAATCGCGCG CATTCCGTGC GACGGCTGAT CGGGCGCGCG
CTGTCGCGCT TGTCCGCGCT GCGCGGCGAC GCGCGCGAGG CAAGGCTGGC GTCGCTGACT
CAAGCCGTGC GACTGCCCGA CCGCTACCTG ACCTCGCGTA CGCGGCAACT CTCGGGGGGC
CTGAAGCAGC GCGTCGCGAT TGCGCGTGCA TTCGCGGGCG ATCCGCGCAT TGTCGTGTGC
GACGAACCGA CCTCCGCGCT AGACGTCTCC GTGCAGGCCG CGATCCTCAA TCTGCTCGCC
GAGCTGCAAC GCGATCGCGG CGTGAGCTAT GTGTTCATTT CGCACGACCT GAACGTCGTG
CGCTACCTGT CCGATCGCAT CGCCGTGCTG TATGTGGGCC GCCTGCTCGA GATCGGGCCC
GCGGCGGCCG TGTTTGACGG CCCGCATCAT CCTTATACGG AAGCGCTGCT GTCGTCGGTG
CCGACACTCG ACCTGCACGA CGGCGAAACG CCCGGCAGCG CGCGAACGCA GCGCATCCAC
CTCTCCGGCG AACTGCCCAG TCCCGCCTCG CCGCCCTCGG GCTGCGTGTT TCAGACCCGC
TGTCCGCGCA AGCTCGGCGC GATCTGCGAA CAGCAGGACC CGCCCTACGC CGAGGCGGGC
GACGGCCATC GCATCCGCTG CCATATCCCC GTCGACGAAT TGCGCAAGCT GCAGCGGCAC
ACCTGA
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| Protein sequence | MNGPSPPPPP ASFPAFDVSK SEQSDALTIV GLTVAYRTRG RERDVLQDVS FRIRRGESYG
LVGESGCGKS TVAMATLRYL ARNGRVKAGR VSIAGKDVNA LDAAALRALR ANSISMVYQD
PSRALNPSLT VARQVAEAFE AAGAVHEAAL RQTVEILRKV RIAEPERVMD SYPHQLSGGM
QQRVVIAMAL ASKPALLILD EPTTGLDATV EAEVLDLVAQ LREEFHTAVL FISHNLAVIG
RMCERVGVLY AGKLVEEGAT QDVFGRPRHP YTVGLLRCLP TVGRSKDTDR LDTIAGSLPQ
PGSVTQGCVY LERCRLADDR CRREAPPPYR VSAQHGDQMS RCHYHERAVE LPRVTPVAPP
ANGRIAYDAS PVLRAQNVSK TFHVNGSALR AVDDVSLEVA KGETLGLVGE SGSGKTTLAK
LLLGLVSPDA GSVLELDGAP LPPRVTHRND DQVKSLQIVF QNPDSALNRA HSVRRLIGRA
LSRLSALRGD AREARLASLT QAVRLPDRYL TSRTRQLSGG LKQRVAIARA FAGDPRIVVC
DEPTSALDVS VQAAILNLLA ELQRDRGVSY VFISHDLNVV RYLSDRIAVL YVGRLLEIGP
AAAVFDGPHH PYTEALLSSV PTLDLHDGET PGSARTQRIH LSGELPSPAS PPSGCVFQTR
CPRKLGAICE QQDPPYAEAG DGHRIRCHIP VDELRKLQRH T
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