Gene Bphy_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0547 
Symbol 
ID6242048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp618653 
End bp620122 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content64% 
IMG OID642592311 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001856785 
Protein GI186475315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.387969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT CGACCAAATC GGCCTCTGCC ACCGCCGGCG ACCGCACCGG CAAACCCACG 
CCAACGGCCC GCTCACTGAC AGTGATGCTG TGGATCGTCG CGACGGGCTT CTTCATGCAG
ACGCTCGATT CGACCATCGT CAACACCGCC TTGCCCGCGA TGGCGCGCAG CCTGGGCGAG
CTGCCGTTGC GCATGCAATC GGTTGTGATC GCGTATTCGC TGACGATGGC CGTGATGATC
CCCGTCTCCG GCTGGCTCGC CGACAAGCTC GGCACACGCC GCGTGTTCAT GGCCGCGATC
CTCGTTTTCA CGATCGGCTC GCTGCTGTGT GCGAATGCGC AGACGCTCAC ACAGCTCGTG
GTCTATCGTG TGCTGCAGGG CGTGGGCGGC GCGATGCTGC TGCCCGTCGG CCGGCTTGCT
GTGCTGCGCG TGTTCCCCGC TGAGCGCTAT CTGCCCGCGC TGTCGTTCGT CGCAATTCCC
GGGCTGATTG GACCACTGAT CGGCCCGACG CTCGGCGGCT GGCTCGTCAA GATCGCCTCG
TGGCACTGGA TCTTCCTGAT CAACGTGCCC GTCGGCATCG TGGGCGTCAT CGCGACGTTC
GTCTTCATGC CCGACAGCCG CAATCCCGAC ACCGCGACGT TCGACATCAA GGGCTACGTG
CTGCTGATCG TCGGCATGGT GTCGATCTCG ATGGCGCTCG ACGGGCGCAC CGAATTTTCG
ATTCAGCACG CGACCGTGCT GATGCTGCTG ATTCTTTCGC TTGGCTGTTT CGTCGCCTAC
GGACTACATG CCGTGCGGGC GGCCAACCCG ATCTTTTCGC TCGATCTGTT CAAGATCCAC
ACGTTCAGCG TCGGACTGCT CGGCAACCTG TTTGCGCGCA TCGGCAGCGG CGCGATGCCG
TATCTGATTC CGCTGCTCTT GCAGGTGAGC CTCGGCTACA GCGCGTTCGA AGCCGGCCTG
ATGATGCTGC CCGTCGCTGC CGCCGGCATG TCGTCGAAAC GTCTCGTCAC GCGCCTCATC
ATGAAGTACG GCTACCGGCG CGTGCTCGTG TCGAACACGG TGCTCGTCGG GCTCGCGATG
GCGAGCTTCT CGCTGACGAG CGAGCATCAG CCGCTATGGC TGCGTCTCGT GCAACTCGCG
TTCTTCGGCG GCGTCAACTC GATGCAGTTC ACCGCAATGA ACACGCTGAC GCTGAAGGAT
CTCGGCACGG GCGGCGCGAG CAGCGGCAAC AGCCTGTTTT CGCTGGTGCA GATGCTTGCG
ATGAGCCTCG GCGTCACGGT CGCCGGCGCG TTGCTCACCA CCTTCACGGG TCTCATGCCG
CGTGTCACGG CAGCCAACTC GCTGCCCGCC TTTCATGCAA CCTTCCTGTG CGTCGGTCTG
ATTACGGCCG CGACGTCGTG GATTTTCGCG CAACTCTCGG CGGATATCCG GCAACCCACG
AAACGCGCCG ATCCGCAGGA ACGCACGTGA
 
Protein sequence
MSESTKSASA TAGDRTGKPT PTARSLTVML WIVATGFFMQ TLDSTIVNTA LPAMARSLGE 
LPLRMQSVVI AYSLTMAVMI PVSGWLADKL GTRRVFMAAI LVFTIGSLLC ANAQTLTQLV
VYRVLQGVGG AMLLPVGRLA VLRVFPAERY LPALSFVAIP GLIGPLIGPT LGGWLVKIAS
WHWIFLINVP VGIVGVIATF VFMPDSRNPD TATFDIKGYV LLIVGMVSIS MALDGRTEFS
IQHATVLMLL ILSLGCFVAY GLHAVRAANP IFSLDLFKIH TFSVGLLGNL FARIGSGAMP
YLIPLLLQVS LGYSAFEAGL MMLPVAAAGM SSKRLVTRLI MKYGYRRVLV SNTVLVGLAM
ASFSLTSEHQ PLWLRLVQLA FFGGVNSMQF TAMNTLTLKD LGTGGASSGN SLFSLVQMLA
MSLGVTVAGA LLTTFTGLMP RVTAANSLPA FHATFLCVGL ITAATSWIFA QLSADIRQPT
KRADPQERT