| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0546 |
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| Symbol | |
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| ID | 6242047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 617108 |
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| End bp | 618382 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642592310 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001856784 |
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| Protein GI | 186475314 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.49841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.628054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA TCGAACTCGA TCCTCCCGGC TTCCAGTCTC CACGCCCCAT AGCGGGCGAT
GAAGGCTCGC GCCGCACCGT CCGGTATGGC GGCTACACGG TTTTCAGCGT GTTTCAGCCG
GTTTTCTCGG TTTCGCACCG CCGCGCGATC GGCTATCACG CATCGCTGCG CGCACACGAC
GAAAACTGCA AGCAGGTGCC GTCCGGTGAA GTCTTCACGC AGGCCGCCAG GCGCGGCGAT
CTGCTCGAAC TCGGGCGGCT CGCCGAATCG CTGCACCTGG GCAACTTCAA TGCGTTCGAC
AGCCACGATG AATGGCTCTT TCTGAGCCTG CATCCCGCCG CATTGATGGA CACGAGCTAC
GGCGACGCGC TGCTCGCAGG CCTCAAGGCG CTCGGCCTGC CCGCGCAGCG CGTGGTGCTC
GAAGTGTCCG AGCAGGCAGG CGGAGAAACG ACGCGCTTCG CCGAGATCAT CGATTCGCTG
CGCAAGTCCG GCTTCCTGAT CGCGCTCGAC GGCTTCGGCG CGAAGCATTC GAACATCGAC
CGCGTGTGGA ATCTGCGGCC CGATATCGTC ACGCTCGACC GCTGCATCCT CGCGCAAGCC
AGCGAGCATT CGCATATCGA GCGCGTGCTG CCCGGCATCG TGTCGATGCT GCATGAATCG
GGGCAACTGG TGCTGATGGG CGGCCTTTCG ACGGAGCGCG ACGCGCTGAT CGCGCTCGAA
TGCAATGTCG ATTTCGTGCA AGGCTCTTTC TTCGCCGCGC CGAGCGTGGA GCCTGTCGCG
CGTCAGGCGA CGGTCAAGCT GATGGACGAA CTGTTGGCCG CGCTGCGGCA ACGTGTGGCC
GCACGCGAAC GCGCGCAGTC CGAGCGGCTC GCGCCGTTCG TCACGGCGCT CGAAACGGCG
AGCGCGCACC TTGTCGAAGG CGAAACCATG GCGGATGCCA CCGCGCCGCT GCTCGCGTTG
CGCGAAACCG CGCGCTGCTT CCTGCTCGAC GGCTCCGGCC GGCAGATTGG CGACAACGTG
CTGCCGTCGG GCCGCGCGTC GCAGCGCGCG AAGCGCTTCC GTCCACTGCT TCATTCGGAA
GGCGCCAGCT GGGAGCGTCG CCCGTATTTC ATCGAGGCCG TGCGCGCACC CGGCCAGGTG
CATCTGACGC CGCCCTATCT GTCGATCAAC GAAGCGCACC TGTGCGTGAC GGCATCGATT
GCGGCTGAAA CGGCGCGCGG CATGCAGGTG CTATGCGTCG ATATCAACTG GGAAGTGGCC
GCGCATCGTA ACTGA
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| Protein sequence | MSMIELDPPG FQSPRPIAGD EGSRRTVRYG GYTVFSVFQP VFSVSHRRAI GYHASLRAHD
ENCKQVPSGE VFTQAARRGD LLELGRLAES LHLGNFNAFD SHDEWLFLSL HPAALMDTSY
GDALLAGLKA LGLPAQRVVL EVSEQAGGET TRFAEIIDSL RKSGFLIALD GFGAKHSNID
RVWNLRPDIV TLDRCILAQA SEHSHIERVL PGIVSMLHES GQLVLMGGLS TERDALIALE
CNVDFVQGSF FAAPSVEPVA RQATVKLMDE LLAALRQRVA ARERAQSERL APFVTALETA
SAHLVEGETM ADATAPLLAL RETARCFLLD GSGRQIGDNV LPSGRASQRA KRFRPLLHSE
GASWERRPYF IEAVRAPGQV HLTPPYLSIN EAHLCVTASI AAETARGMQV LCVDINWEVA
AHRN
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