| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0536 |
|---|
| Symbol | |
|---|
| ID | 6242037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 607579 |
|---|
| End bp | 608382 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642592300 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_001856774 |
|---|
| Protein GI | 186475304 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.147701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CCCAGCACAC TCCGCCCTTC ATCGCCGTCG TCCCGGCGCG CCTCGCGTCG
ACGCGTCTGC CGAACAAGCC GCTCGCCGAT ATCGGCGGCA AGCCGATGGT CGTGCGCGTC
GCGGAACGCG CGGTCGAATC GGGTGCGCAG CAGGTGCTGA TCGCCACCGA CGCGCAAGCG
GTCTTCGATG TCGCGCGCGC GCATGGCATC GACGCGATGA TGACGCGTGC CGATCATCCG
TCGGGCACCG ACCGTCTCGC GGAGGTGGCC GCGCATTACG GCTGGCGCGA CGACATGATC
GTCGTCAACG TGCAGGGTGA CGAACCGCTG ATCGATCCCG CTCTCGTGCG CGGCGTAGCG
TCGCACCTTG CTGCGACGGA CGGCTGCGCG ATCGCGACGG CCGCGCATCC CATTCACGAT
CCCGCCGACG TGTTCAATCC GAACGTGGTC AAGGTCGTGC CCGACGCGCG CGGCGTGGCG
CTGTACTTTT CGCGTGCGCC GATCCCGTGG GCCCGCGACG CCTATCAGCC GCACTGGCCG
AACATCGCGC AGATGCCCGC TCCGCCTGCG CCCGCAGCCG TCTACCGACA CATCGGGCTG
TATGCGTATC GCGCGAAGTT CCTCCGTACT TACCCGAGTC TCTCTATCTC GCCGATCGAA
CAGGCCGAGG CCCTCGAACA GCTGCGCGCG ATGTGGCACG GCGAGCGCAT CGCGGTGCTC
GTCACGAACG ACGCGCCGCT GCCCGGCGTC GACACACCCG ACGATCTTGC CCGCGTACAG
GCGTTTTTCG GGTCGTCAGC GTAG
|
|---|
| Protein sequence | MNDTQHTPPF IAVVPARLAS TRLPNKPLAD IGGKPMVVRV AERAVESGAQ QVLIATDAQA
VFDVARAHGI DAMMTRADHP SGTDRLAEVA AHYGWRDDMI VVNVQGDEPL IDPALVRGVA
SHLAATDGCA IATAAHPIHD PADVFNPNVV KVVPDARGVA LYFSRAPIPW ARDAYQPHWP
NIAQMPAPPA PAAVYRHIGL YAYRAKFLRT YPSLSISPIE QAEALEQLRA MWHGERIAVL
VTNDAPLPGV DTPDDLARVQ AFFGSSA
|
|---|
| |