| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0523 |
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| Symbol | xerD |
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| ID | 6242024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 594612 |
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| End bp | 595559 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642592287 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001856761 |
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| Protein GI | 186475291 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.221654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATG TGCTGACCGA AGACGCGCAG CCCGCGTCGC CTGCTGTTTC GCCGCTGCTG
CTGACGAGCG GCGCGTCGAT CGATGCCTTC TGCGATGCGC TATGGCTCGA ACATGGCCTC
GCGCGCAACA CGCTCGACGC ATACCGACGC GACTTGCGGC TCTTTTCCGA ATGGCTCGCC
GAGCGGCGCG ACGCTTCTCT CGATGCCGCG AGCGAAGCCG ATCTGACGGC CTATAGCGCC
GCGCGCTCGG CCGACAAGTC GACCTCCGCG AACCGGCGTC TGTCTGTGTT TCGCCGCTAC
TATGCGTGGG CCGTGCGCGA GCATCGCGCG TCAGCGGATC CAACCTTGCG CATCCGTTCG
GCCAAGCAGC CGCCGCGTTT CCCGTCGACC TTGACGGAAG CGCAGGTCGA AGCGCTGCTC
GGGGCGCCGG ACGTGACGAC GCCGCTCGGC CTGCGCGACC GCACGATGCT CGAACTGATG
TACGCGAGCG GCTTGCGCGT CAGCGAACTG GTCACGTTGA AGACGGTGGA GGTCGGGCTG
AACGAGGGCG TCGTGCGCGT GATGGGCAAG GGCTCGAAAG AGCGGCTGAT ACCGTTCGGC
GAAGAGGCGC ACGCCTGGAT TGAACGCTAT CTGCGCGAGT CTCGCCCCGC ATTGCTCGGC
CAGCGTTCCG CTGATGCGCT GTTCGTCACC GCGCGCGCCG AAGGCATGAC GCGCCAGCAG
TTCTGGAACA TCATCAAGCG TCATGCGCTG ACGGCGCATG TGCACGCGCC CCTGTCACCG
CACACGCTGC GGCACGCGTT CGCGACGCAT CTGCTGAATC ACGGCGCGGA CCTGCGTGTC
GTGCAGCTGC TGCTCGGCCA CACCGATATC TCGACCACGC AGATTTACAC GCACGTCGCA
CGTGAGCGGC TCAAGTCGCT GCACGCGGCT CACCATCCGC GCGGCTGA
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| Protein sequence | MTDVLTEDAQ PASPAVSPLL LTSGASIDAF CDALWLEHGL ARNTLDAYRR DLRLFSEWLA
ERRDASLDAA SEADLTAYSA ARSADKSTSA NRRLSVFRRY YAWAVREHRA SADPTLRIRS
AKQPPRFPST LTEAQVEALL GAPDVTTPLG LRDRTMLELM YASGLRVSEL VTLKTVEVGL
NEGVVRVMGK GSKERLIPFG EEAHAWIERY LRESRPALLG QRSADALFVT ARAEGMTRQQ
FWNIIKRHAL TAHVHAPLSP HTLRHAFATH LLNHGADLRV VQLLLGHTDI STTQIYTHVA
RERLKSLHAA HHPRG
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