Gene Bphy_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0519 
Symbol 
ID6242020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp590711 
End bp592258 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content65% 
IMG OID642592283 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001856757 
Protein GI186475287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGAA AGATGTTGAT CAAACCGTTC CGCTCGATCG AATCGGCGGC CACCGCGACG 
CATAACTGGC GCCGCCGGCA GATTCTTCAC GCGGGCGCTT CCACGCTCGT CCTCGGCCTT
GCCGCGCCGC GCCTCGCGTT GGCTTCGTCG GTGCTCGGCG TGCGCGTGTG GCCCGCGCGC
GACTACACGC GCGTGACCAT CGAATCCGAT CAGCCGCTGC AGAACACGCA GCAACTGCTG
CAGGGACCGG ACCGCCTGGT GGTCGATCTG AACGGTCTCG ACCTCGACCA GGCGTTGAAG
GATCTCGTCT CGAAGATCGC GCCGAACGAT CCGCAGATTC AATCCGTGCG CGTCGGCCAG
TATCAGCCGC ATGTCGTGCG GATGGTGTTC GACCTGAAGG GGTCGGTGAA ACCGCAGGTG
TTCACGCTGC CGCCTGTCGG CGCGTACAAG TACCGGCTCG TGTTCGACCT GTATCCCGCC
GTCGCGCCCG ATCCGCTGAT GGATCTGCTC GCGCAGACCG AGCGCAAGGA ACAGCAGCTG
AAGGACAACG CCGCGCCGCC CGCCGCGACG CTCAACGGCC CGACCACGCC GCCCGGCGAC
AACAGCGACG CGTTCTTCGA GAAGTACGCG CAGAACAACG CGCCCTCGCC TGCTGCGCCC
GTGCCGCATC CGCCGCTGCA TGGCGCGCCT GCGCCGACGC CGCACATGCC GCCGAAGCCC
GCGCCAACAC CCGCGCCGCC GGTTATCGCG CGCAACAACG ACAGCGATGC GGACAACGCC
GGCGACAACA ACGACGACGA GTACAAGTTC ACCGCGCCGA AGAAGGGCAG CAATACGGTG
CGTCTGCTGA CGGTCGCGAT CGATCCGGGC CACGGCGGCG AAGATCCCGG CGCGATCGGC
GGCAGCGGGA CCTACGAGAA ACACGTCGCG CTCGACATCG CGAAGAAGCT GCGCGCGAAG
ATCGATGCGC AGCCGAACAT GCGCGCGATG ATGACGCGCG ACGCCGACTT CTTCGTGCCG
CTAAACGTGC GTGTGCAGAA GGCGAGGCGT GTCGGCGCGG ACCTGTTCGT GTCGATTCAC
GCGGACGCGT TCACCACCCC GGAAGCGAGC GGCTCGTCGG TATTCGCGCT GTCGGAGCAT
GGCGCGTCGA GCGCGGCCGC GCGCTGGATG GCGAACAAGG AGAACTCGTC GGATCAGATT
GGCGGCATCA ACATCAAGTC CGCCGATGCC AGCGTGAACC GCGCGCTGTT CGACATGTCG
ACGACGGCGC AGATCCGCGA TTCGATGCGG TATGGCACAT TCGTGCTCAA GGAGATCGGC
GGGATCAACC GGTTGCACAA GGGCTCTGTG GAGCAGGCCG GGTTTGCGGT TCTCAAGGCC
CCGGATATTC CGTCGATTCT CGTCGAAACT GCGTTTATCA GTAACCCTGA TGAGGAGCGC
CGTCTGAATG ACGACGCGTA TCGGGATAAG ATGGCCAACG CCATTATGAG CGGCATCAAG
CGGTACTTTG CGGCGAATCC GCCGCTTGCC AAGAGTCGGA TGACGTAA
 
Protein sequence
MSRKMLIKPF RSIESAATAT HNWRRRQILH AGASTLVLGL AAPRLALASS VLGVRVWPAR 
DYTRVTIESD QPLQNTQQLL QGPDRLVVDL NGLDLDQALK DLVSKIAPND PQIQSVRVGQ
YQPHVVRMVF DLKGSVKPQV FTLPPVGAYK YRLVFDLYPA VAPDPLMDLL AQTERKEQQL
KDNAAPPAAT LNGPTTPPGD NSDAFFEKYA QNNAPSPAAP VPHPPLHGAP APTPHMPPKP
APTPAPPVIA RNNDSDADNA GDNNDDEYKF TAPKKGSNTV RLLTVAIDPG HGGEDPGAIG
GSGTYEKHVA LDIAKKLRAK IDAQPNMRAM MTRDADFFVP LNVRVQKARR VGADLFVSIH
ADAFTTPEAS GSSVFALSEH GASSAAARWM ANKENSSDQI GGINIKSADA SVNRALFDMS
TTAQIRDSMR YGTFVLKEIG GINRLHKGSV EQAGFAVLKA PDIPSILVET AFISNPDEER
RLNDDAYRDK MANAIMSGIK RYFAANPPLA KSRMT