| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0506 |
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| Symbol | |
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| ID | 6242007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 578240 |
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| End bp | 579175 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642592270 |
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| Product | tryptophan 2,3-dioxygenase |
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| Protein accession | YP_001856744 |
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| Protein GI | 186475274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.88233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0076457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATC ACATGAAGAT GATGGAAGCC ACGCCGGCGC AAGGCTGTCC GTTCGGACAC
GGCGGCACGC CGACGCTGCG TACGGATCAC GCTTCGCACA TGGCTGTCGA TGAAGGCGAG
GGTTGGCACG ACGCGCAGCT CGATTTTTCG AAGTCGATGA GTTACGGCGA TTATTTGTCG
CTGGGTTCGA TTTTGCGTGC GCAGCACCCT TTATCGCCCG ATCACAACGA GATGCTGTTC
ATCATCCAGC ATCAGACGAG CGAGCTGTGG ATGAAGCTCG CGTTGTATGA GTTGCGCGCG
GCGCTGGCTT GCGTGCATCG GGATGAATTG CCGCCTGCGT TCAAGATGCT CGCGCGTGTG
TCGCGGATTC TCGAGCAGCT TGTGCAAGCG TGGAATGTGT TGTCGACGAT GACGCCCTCC
GAATACACGT CGATGCGGCC GTTTCTCGGC AGTTCGTCGG GGTTTCAGTC TTATCAGTAT
CGCGAGCTTG AGTTCATGCT TGGAAACAAG AATGAGCAGA TGCTCAAGCC GCATGCGCAT
CATCCTGATG TTCTTGCCGA GGTCAAAGCT GCGCTCGAGG CGCCGTCTTT CTATGACGAA
GTGATTCGCC TGCTTTCGCG GCGCGGGTTC GCTATCGATT CGTCACGGCT CGAGCGTGAC
TGGACTCAGC CTACCGTGTA TGACGCTTCT GTCGAGGCGG CCTGGCTGGA GGTTTATCGC
AATCCGTCCC AGCATTGGGA GCTGTATGAG ATGGCCGAAG AACTCGTCGA TCTTGAGGAT
GCCTTCCGCC AATGGCGGTT CCGGCATGTG ACCACAGTTG AACGCATTAT CGGGTTCAAG
CAGGGTACGG GTGGCACTAG CGGTGCGCCT TATCTGCGCA AGATGCTGGA CGTCGTGTTG
TTTCCTGAGC TGTGGCAGGT TAGGACGATG TTGTAG
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| Protein sequence | MTDHMKMMEA TPAQGCPFGH GGTPTLRTDH ASHMAVDEGE GWHDAQLDFS KSMSYGDYLS
LGSILRAQHP LSPDHNEMLF IIQHQTSELW MKLALYELRA ALACVHRDEL PPAFKMLARV
SRILEQLVQA WNVLSTMTPS EYTSMRPFLG SSSGFQSYQY RELEFMLGNK NEQMLKPHAH
HPDVLAEVKA ALEAPSFYDE VIRLLSRRGF AIDSSRLERD WTQPTVYDAS VEAAWLEVYR
NPSQHWELYE MAEELVDLED AFRQWRFRHV TTVERIIGFK QGTGGTSGAP YLRKMLDVVL
FPELWQVRTM L
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