| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0505 |
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| Symbol | |
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| ID | 6242006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 577351 |
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| End bp | 578091 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642592269 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001856743 |
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| Protein GI | 186475273 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00369572 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATGA CCTTTGATTT TTCCGGTCGC TCGATACTCG TGACGGGCGC ATCGAGCGGC
ATCGGCCGCA CCACGGTCGA GCTGTTGTGC GCAAGCGGCG CGCAGGTTGT GGCGGCGGCG
CGCAATGTGG GTGAGTTGGC GCGGCTTGCC GAGGAGGCGG GCTGTGAGCC GTTGGTGCTC
GATGTCGGCA ACGAGCACGC CATTGACGAA GCGTTGGGTT CGCTCGATGT CGTCTTCGAT
GGCCTTGTGA ATTGTGCGGG CACGACGGTG CTCGAGCGTG CGATCGACAC GACGGCAGCG
AGCTTCGATA ACGTGATGAA TGTGAATGCG CGCGGCGCGG CTTTAGTGGC GCGGCATGTT
GCGCGTGGGA TGATCGGCGC TCGGCGCGCG GGCAGTATTG TCAATGTGTC TAGCCAGGCG
GCGCTCGTGG GCCTTGAGGA TCATCTGAGC TATTGCGCGT CTAAAGCGGC TATGGATGCC
ATTACTCGTG TTTTATGTGT TGAACTTGGG GGGCATGGCA TTCGCGTGAA TAGCGTGAAT
CCAACCGTTA CCTTGACGCC GATGGCAGTG AAGGCCTGGA GCGAGCCTTT CAAGCGTGAT
CCGGCTTTGC AGGCGATTCC GTTGAAGCGG TTCGCTGAAC CGCGAGAAGT CGCTGAGCCG
ATTTTGTTTT TGCTGAGCGA TGCTGCTTCC ATGATCAGTG GTGTTGCCTT ACCGATTGAT
GGCGGCTACA CCGCGAGGTA A
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| Protein sequence | MNMTFDFSGR SILVTGASSG IGRTTVELLC ASGAQVVAAA RNVGELARLA EEAGCEPLVL
DVGNEHAIDE ALGSLDVVFD GLVNCAGTTV LERAIDTTAA SFDNVMNVNA RGAALVARHV
ARGMIGARRA GSIVNVSSQA ALVGLEDHLS YCASKAAMDA ITRVLCVELG GHGIRVNSVN
PTVTLTPMAV KAWSEPFKRD PALQAIPLKR FAEPREVAEP ILFLLSDAAS MISGVALPID
GGYTAR
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