| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0488 |
|---|
| Symbol | |
|---|
| ID | 6241989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 556291 |
|---|
| End bp | 556782 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642592252 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_001856726 |
|---|
| Protein GI | 186475256 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00616714 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00143129 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT CGTCCCGTCT TCATTCCGCC GTTGCCGGCG ATCAGGCGGC GCGGCTCGCG
CATAAGCTGG CGCGAGCCGA TGCGCTCGCC GCCGAGCGCG GTCTCGCGCT GACGACCCTG
CGCCGCCAGG TCTACACGCT GATCGCAGAG AGCGAGCGCC CCGTCGGCGC GTACGATCTG
CTCGCCGCGC TGGAACCGCA ACGCGGCCGC GTGCCGCCGA CGACCGTCTA TCGCGCGATC
GAATTCCTCG TCGAGCATGG CTTCGTGCAT CGGATCGAAT CGAAGAACGC ATTTTTCGCG
TGCTGCCAGA TGGGCGAGCC ACATCAGAGC CAGTTCCTCA TGTGCGACGC ATGCGGCGAA
ACCGTCGAGA TTCCCGGCGA CAGGCTGGCC GCGCAGTTGT CGCGCAGCGC GCCCGCCCAG
GGATTCGAGG TGCATCACCA GGTCGTCGAG TTGAGCGGAC TGTGCGCCGC CTGCAAGCAC
GGCCACGCCT GA
|
|---|
| Protein sequence | MTRSSRLHSA VAGDQAARLA HKLARADALA AERGLALTTL RRQVYTLIAE SERPVGAYDL
LAALEPQRGR VPPTTVYRAI EFLVEHGFVH RIESKNAFFA CCQMGEPHQS QFLMCDACGE
TVEIPGDRLA AQLSRSAPAQ GFEVHHQVVE LSGLCAACKH GHA
|
|---|
| |