Gene Bphy_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0485 
Symbol 
ID6241986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp553594 
End bp554385 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID642592249 
ProductABC-3 protein 
Protein accessionYP_001856723 
Protein GI186475253 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.336382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0047425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGAAT ACGATTTCAT GGTGAACGCC TTCGCGGCGT CGGGGATTGT GGCCGTGCTG 
TCGGGCATCG TCGGGTACTT CCTCGTGATG CGCGGGCAGA CCTTCGCGGG GCACGCGTTG
TCTCACGTCG GCTTCACGGG CGCAACGGGC GCGGTGCTGA TCGGTATTTC GCCGATCTGG
GGGATGATAG GCTTCACGCT CGCGGCGGGC GTCGGCATGG GCGCGCTCGG CGAAAAGCTG
GCGGGCCGCG ATGTGGCCAT CGGCGTGATC CTGTCGCTCG CGCTTGGCTT CGGCCTTCTG
TTTCTGCACT TCTTCACCGC CTATGCGACG CAGGTCACGG CGCTGCTGTT CGGCAACGTG
CTCGGCGTCA GTTCGTCGAC GCTCGCCGTG CTTGCCGCGC TTGGCGTCGT CAGTCTGATC
GCGCTGGCCG CAATCATGCG CCCGTTGCTG TTTGCTTCGC TGCAGCCCGA GCTGGCGGAA
GCGAAAGGGG TGTCGCTGCG GCTCGTGTCG GTGCTGTTTC TCGCGATCGC GGCGCTCGCC
GTCGCCGCAT GCACGCAGAT CGTCGGCGTG CTGCTCGTGT TTACATTGAT GGTCGGACCG
GCCGCCGCCG CGCAAAACCT GTCGACGCGG CTCTCTGTCG GACTCGTGCT CGCTGCGCTG
CTCGCACTCG CGCAGGCGTG GATCGGCGTG ACGCTCGCCT TCTATACCGA CTGGCCGACG
AGCTTCTGGA TCACGCTGCT CGCGGCGCTG GTATACGGCG CGAGTCTGCT GGTGCAACAT
GCGCGCAGAT AG
 
Protein sequence
MFEYDFMVNA FAASGIVAVL SGIVGYFLVM RGQTFAGHAL SHVGFTGATG AVLIGISPIW 
GMIGFTLAAG VGMGALGEKL AGRDVAIGVI LSLALGFGLL FLHFFTAYAT QVTALLFGNV
LGVSSSTLAV LAALGVVSLI ALAAIMRPLL FASLQPELAE AKGVSLRLVS VLFLAIAALA
VAACTQIVGV LLVFTLMVGP AAAAQNLSTR LSVGLVLAAL LALAQAWIGV TLAFYTDWPT
SFWITLLAAL VYGASLLVQH ARR