| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0480 |
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| Symbol | |
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| ID | 6241981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 546343 |
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| End bp | 547860 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592244 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001856718 |
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| Protein GI | 186475248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0104002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAT ATTCGTTGAT GGCAGTGGCC GTCGCGCTGT TCGCCACGGG CTGCACGATG
GAGCCGACGT ACCACCAGCC GGCCGCGCCC GTTTCGGGCA CGTTCCCGAG CGACGGCGTG
TACGCGACGC AACCCGTGCC CGGTGCGGGC GCGCGCTCGG CGAACGGCCA GCCGGCGGTG
GAGATCGGCT GGCGCGACTT CTTCGTCGAT CAGCGCCTGC AACGTCTGAT CGAGATCGCG
CTGAAGAACA ATCGCGATCT GCGCGTGTCG GTGCTGAACA TCGAGGCTTC GCGCGCGCAA
TATCAGATTG CGCGCGCGGC GCTGTTCCCG GCGCTCGACG CTTCCGCGTC GCAGACGAAG
CAGCGCACGC CGAAGAATCT GTCGGTGTTC GGCAATACGA TTTCCAACGA GTATTCGGTC
GGCTTGAATG CTTCGTGGGA AATCGACTTC TTCGGCCGGA TTCGCAGCCT GAAGGACCAG
GCACTCGCGC AGTATCTGGC GACGGCACAG GCACGCAAGG CGGCGGAAAT CGCGCTGGTC
GCATCGGTCG CGGATCAGTA CATGACCGTG CTGGCCTATG ACGATCTGCT GAAGGTCACG
GAGAACACGC TTAAGAGCGC GCAAGAGTCT TATCGGATCA CGAAGTTGCA GTACGACACG
GGTACGGGTT CTGAACTCGA CCTGCGTCAG GCTCAGACCG TTGTCGAGCA GGCGACTGCG
AACCTGCAGT CGCAGGCGCG TTTGCGGGCG CAGGCTGAGA ACGCACTTGT TCTCCTTGTT
GGTGAGCCGT TGCCGTCTGA TATGCCGAGC GGACTTATCC TCGACGATCA GAATCTGCTG
ACGGACATTC CGGCCGGTCT GCCGTCGGAT CTGCTCACGC GACGTCCCGA CATCATGGAG
GCCGAGCAGA ACCTGCTGGC GGCCAACGCG AATATCGGTG CGGCGCGCGC GGCCTTCTTC
CCGAAGGTTT CGTTGACGGG CAGCTTCGGC ACGCTGAGCC CGACACTCGG CGGGCTGTTC
AAGCCAGGTT CGGCGGCGTG GAGCTTCGCG CCGACGATCA CGCTGCCGAT CTTCGAAGGC
GGCCAGAACA TCGCGAACCT GGATCTCGCC AACGTCGAGA AGAACATCCA GATCGCGCAG
TACGAAAAGG CGATTCAGAC GGCGTTTCGC GAGGTGGCCG ACGGGCTCGC GGCGCGCGGC
ACCTACGATG AGCAGATCAA GGCGCTCGAA CGCGATACGT TCGCGGAACA GCGTCGACTG
GATCTGTCGG ACCTGCGTTA CCGGAATGGC GTCGACAGCT ATCTCGCGGT GCTGACCGCG
CAGACCAGCC TGTATAGCGC ACAACAGCTG CTGATCACGG CGCGCATGGA GCGTCTGACG
AACCTCGTCG ATCTGTACAA GGCGCTCGGC GGCGGCTGGA TCGAACATGC AGGCGATCAG
CCGCGTCCGG CGGACGCGCC TGTCGATTAC GGCGCGGCCA GCGCGCCTGT TGCCGCTTCG
GCCGCGACGG CGGGCTGA
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| Protein sequence | MHKYSLMAVA VALFATGCTM EPTYHQPAAP VSGTFPSDGV YATQPVPGAG ARSANGQPAV
EIGWRDFFVD QRLQRLIEIA LKNNRDLRVS VLNIEASRAQ YQIARAALFP ALDASASQTK
QRTPKNLSVF GNTISNEYSV GLNASWEIDF FGRIRSLKDQ ALAQYLATAQ ARKAAEIALV
ASVADQYMTV LAYDDLLKVT ENTLKSAQES YRITKLQYDT GTGSELDLRQ AQTVVEQATA
NLQSQARLRA QAENALVLLV GEPLPSDMPS GLILDDQNLL TDIPAGLPSD LLTRRPDIME
AEQNLLAANA NIGAARAAFF PKVSLTGSFG TLSPTLGGLF KPGSAAWSFA PTITLPIFEG
GQNIANLDLA NVEKNIQIAQ YEKAIQTAFR EVADGLAARG TYDEQIKALE RDTFAEQRRL
DLSDLRYRNG VDSYLAVLTA QTSLYSAQQL LITARMERLT NLVDLYKALG GGWIEHAGDQ
PRPADAPVDY GAASAPVAAS AATAG
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