| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0479 |
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| Symbol | |
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| ID | 6241980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 543138 |
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| End bp | 546332 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642592243 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001856717 |
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| Protein GI | 186475247 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.981936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0489217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TTTTTATTGA TCGCCCGATC TTTGCTTGGG TGATCGCCAT CATTCTGATG
CTGGCGGGTC TGGCGTCGAT CTTCACACTG CCCGTCGCGC AATATCCGAC CATTGCGCCG
CCCGCCGTGC AGATCAGCGC GACCTACCCG GGCGCATCGG CGAAAACGGT TGAAAACACC
GTCACGCAGG TGATCGAGCA GCAGATGAGC GGTCTCGACC ACCTGCTGTA CCTGTCGTCG
ACTTCGGACG ACTCTGGCAC GGCTACCATC ACGCTGACGT TCGCGGCGGG CACCAACCCG
GACATCGCGC AGGTGCAGGT GCAGAACAAG CTGCAGCTCG CGACGCCGTT GCTGCCGCAG
GTGGTGCAGC AGCTCGGCAC GAAGGTCACG AAGTCGAGCA GCAGCTTCCT GCTGGTCATG
GCGTTCGTGT CGACGGACGG CAGCATGACC AAGTACGACC TCGCGAACTA CGTCGCGTCG
AACGTGCAGG ACCCCGTCAG CCGTATCGAC GGCGTGGGTA CCGTCACGCT GTTCGGCTCG
CAGTATGCGA TGCGGATCTG GCTCGACGCC CACAAGCTGA CCAACTTCGG CCTCACGCCC
GTCGACGTCG AAACGGCGTT GCAGGCGCAG AACGTCCAGG TGGCGGGCGG CTCGCTCGGC
GGCACGCCGT CGATTCCGGG CCAGCTGCTG CAGGCCACTA TCAGCGAAGC GACGCTGCTG
ACCACGCCCG AGCAGTTCGG CAACGTGCTG TTGAAGGTCA ACCAGGACGG CTCGCAGGTG
CGCATCAAGG ACGTCGCACG CATCGAGCTG GGCGGCGAAA ACTACAATTT CGACACCAAG
TACAACGGTC AGCCGACGGC GGGCTTCGGT ATCCAGCTGG CGACGGGCGC CAACGCGCTG
GCGACGGCGA AGGCCGTGCG CGACAAGATC GACCAGCTCT CGAAGTACTT CCCGCATGGT
CTCGTCGTGA AGTACCCGTA CGACACGACC CCGTTCGTGC GACTGTCGAT CGAAGAAGTG
GTCAAGACGC TGCTCGAAGG TATCGTGCTC GTGTTCCTGG TCATGTACCT GTTCCTGCAG
AACCTGCGCG CCACGCTGAT CCCGACGATC GCCGTGCCCG TGGTGCTGTT GGGCACGTTC
GCGATCATGA GCGCCGTGGG TTTCTCGATC AACGTGCTGT CGATGTTCGG TCTAGTGCTC
GCTATCGGCC TGCTGGTGGA CGATGCCATC GTGGTCGTGG AGAACGTCGA GCGGGTGATG
TCCGAGGAGG GCCTGTCGCC GAAAGACGCA ACCCGCAAGG CGATGGACCA GATCACGGGC
GCGCTGATCG GCGTCGCGCT GGTGCTGTCG GCCGTGTTCG TGCCGGTGGC GTTCTCGGGC
GGTTCGGTCG GCGCGATCTA TCGTCAGTTC TCGCTGACGA TCGTCGCGGC GATGGTGCTT
TCCGTGCTGG TCGCGTTGAT TCTCACGCCG GCGCTGTGCG CGACGATCCT GAAGCCGATC
CCGCAGGGCC ATCACGAAGA GAAGAAGGGC TTCTTCGGCT GGTTCAACAA GACCTTCGAC
AGGAGCCGCG ACAAATACCA CTCGGGCGTG CATCACGTGA TCAAGCGCTC GGGCCGCTGG
CTCATCATCT ATCTGGTGGT GATCGTCGCG GTGGGTCTGC TGTTCGTGCG TTTGCCGAAG
TCGTTCCTGC CGGATGAAGA CCAGGGCACG ATGTTCGTGC TGGTGCAGAC GCCGTCCGGC
TCGACGCAGG AAACCACGGC GCGCGCCCTG AAGGACATCT CCGACTGGCT GCTGAACGAC
GAGAAGTCGA TCGTCGAATC GACGTTCACC GTGAACGGCT TCAGCTTCGC GGGCCGCGGC
CAGAATTCGG GTCTCGTGTT CGTGCGGATG AAGGACTACG CGGAACGTCA GCACGCGAAC
CAGAAGGTTC AGGCGCTGGT CGGACGGATG TACATGCACT TCGCGGGCTA CAAGAACGCG
GTCGTGTTCC CGGTCAATCC GCCGTCCATT CCGGAACTGG GTACGGCGTC GGGCTTCGAC
TTCGAGCTGC AGGACCGCGC GGGCCTTGGC CACGAAAAGC TGATGGCGGC GCGTAACCAG
CTGCTCGGCA TGGCCGCGAA AGATCCGACG CTCGCACAGG TGCGTCCGAA CGGTCTGAAC
GACACGCCGC AGTTCAAGGT GTCGATCGAT CACGAAAAGG CGGCGGCGCA AGGCGTGAGC
CTCTCGACCA TCGACCAGAC GTTCTCGATC GCATGGGCAT CGGCGTACGT GAACAACTTC
CTCGATACGG ACAGCCGGAT CAAGAAGGTG TACCTGCAAG CCGACGCACC GTTCCGTATG
ACGCCCGAGA ATCTGAGCGA CTGGTACGTG CGCAATACGG CGGGCAGCAT GGTGCCGTTC
TCGGCCTTCG CAAGCGGCCA GTGGACCTAC GGTTCCCCCA AGCTCGAGCG CTATAACGGC
ATTTCGGCCG TGGAAATCCA GGGCCAGGCG GCGCCCGGCA AGTCGACGGG TCAAGCCATG
ACGGCGATGG AAGCGATCGC GGCGAAGCTG CCGGCGGGTA TCGGCTATGA ATGGACGGGT
CTGTCGTTCC AGGAGCGACA GTCGGGTTCG CAGGCGCCGA TCCTGTACGG CATCTCGATC
CTCGTCGTGT TCCTGTGTCT TGCCGCACTG TATGAAAGCT GGTCGATTCC GTTCTCGGTG
ATCATGGTGG TGCCGCTCGG CGTGCTGGGC GCGCTGCTCG CGGCGACACT GCGCGGGCTG
GAGAACGACG TGTTCTTCCA GGTCGGTCTG CTGACGACGG TGGGGCTGTC CGCGAAGAAT
GCCATTCTGA TCGTGGAATT CGCGCGAGAG TTGCAGCAGG GCGAAGGCAT GGGGCCGGTG
GAAGCGGCGT TGGAAGCGGC GCGTCTGCGG TTGCGTCCCA TCCTGATGAC GTCCCTCGCG
TTCATTCTCG GCGTGCTGCC GCTTGCGATC AGCAACGGCG CGGGTTCGGC CAGCCAGCAT
GCAATTGGTA CGGGTGTGAT CGGCGGTATG TTGACGGCGA CCTTCCTCGC GATTTTCATG
ATCCCGATGT TCTTCGTGGT GATTCGCGCG AAGTTCACGG GCGAGAAGGA AGACCCGGAC
GAAGCGATGA AGCACTACAA CGAGCACCAT CCGCATGAAC CGCCAGGCGG CAGCGGCCCG
GGCAACGCCA GCTGA
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGLASIFTL PVAQYPTIAP PAVQISATYP GASAKTVENT
VTQVIEQQMS GLDHLLYLSS TSDDSGTATI TLTFAAGTNP DIAQVQVQNK LQLATPLLPQ
VVQQLGTKVT KSSSSFLLVM AFVSTDGSMT KYDLANYVAS NVQDPVSRID GVGTVTLFGS
QYAMRIWLDA HKLTNFGLTP VDVETALQAQ NVQVAGGSLG GTPSIPGQLL QATISEATLL
TTPEQFGNVL LKVNQDGSQV RIKDVARIEL GGENYNFDTK YNGQPTAGFG IQLATGANAL
ATAKAVRDKI DQLSKYFPHG LVVKYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATLIPTI AVPVVLLGTF AIMSAVGFSI NVLSMFGLVL AIGLLVDDAI VVVENVERVM
SEEGLSPKDA TRKAMDQITG ALIGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVAAMVL
SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNKTFD RSRDKYHSGV HHVIKRSGRW
LIIYLVVIVA VGLLFVRLPK SFLPDEDQGT MFVLVQTPSG STQETTARAL KDISDWLLND
EKSIVESTFT VNGFSFAGRG QNSGLVFVRM KDYAERQHAN QKVQALVGRM YMHFAGYKNA
VVFPVNPPSI PELGTASGFD FELQDRAGLG HEKLMAARNQ LLGMAAKDPT LAQVRPNGLN
DTPQFKVSID HEKAAAQGVS LSTIDQTFSI AWASAYVNNF LDTDSRIKKV YLQADAPFRM
TPENLSDWYV RNTAGSMVPF SAFASGQWTY GSPKLERYNG ISAVEIQGQA APGKSTGQAM
TAMEAIAAKL PAGIGYEWTG LSFQERQSGS QAPILYGISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVLG ALLAATLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQGEGMGPV
EAALEAARLR LRPILMTSLA FILGVLPLAI SNGAGSASQH AIGTGVIGGM LTATFLAIFM
IPMFFVVIRA KFTGEKEDPD EAMKHYNEHH PHEPPGGSGP GNAS
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