| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0478 |
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| Symbol | |
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| ID | 6241979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 541870 |
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| End bp | 543120 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642592242 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001856716 |
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| Protein GI | 186475246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0350722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0228976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG AACGGGTTCC ATTCCGCTTA CTCACTGCCG CGACGGCTGC CGTAATGCTG
GCAGCGTGCG GACAAAAACA ATCAGCACCT CCGCCTCAAA CTCCTGAAGT CGGCGTCGTC
ACGGTCCAGC CGCAAGCCGT GCCCGTCGTC ACCGAACTGC CGGGCCGCAC CAGTGCGTTC
CTCGTTGCGC AAGTGCGCGC GCGGGTGGAC GGCATCGTGC TGCGCCGGGA ATTTACGGAA
GGCACGCAGG TCAAGGCCGG CCAGCGTCTG TACAAGATCG ACCCGGCGCC GTACATCGCC
ACGCTGAACA GCGCGAAGGC ATCGCTTGCC AAGGCGCAGG CGAATCTCGC GTCGACCACC
GCACAGGCGA ACCGCTACAA GGTGCTGGTC GCGGCGAACG CCGTCTCGAA GCAGGACTAC
GACAACGCCG TGGCCGCCGA AGGCCAGGCG GCCGCCGACG TCGCAGCGGG CAAGGCCGCC
GTCGACACCG CGCAGATCAA CCTCGGCTAT ACGGACGTCG TGTCGCCCGT GTCGGGCCAG
GTCGGGATAT CGCAGGTCAC GCCGGGCGCG TACGTGCAGG CGAGCCAGGC GACGCTGATG
TCGACCGTGC AGCAACTCGA TCCCGTCTAC GTGGACGTCA CGCAGTCGAG CCTTTCGGGC
CTGAAGCTGC GCCGCGCAAT CCAGGCAGGC CGCCTGAAGA CCAACGGCCC GAACGCCGCG
AAGGTCGAGC TGGTGCTCGA AGACGGCCGC GTCTATTCGG AGAAGGGCAA GCTGCAGTTC
ACCGACGTCA CCGTCGACCA GACCACGGGC TCAGTGACGA TCCGCGCGAT CTTCGCGAAC
AAGGATCATG TGCTGCTGCC GGGCATGTTC GTGCGCGCGC GCATTGAGGA AGGCGTCAAC
GAAAACGCGC TGCTGGTGCC GCAGATCGGC GTCACGCACG ACCAGAAGGG CCAGCCGACG
GCGCTCGTAC TGAACAAGGA CGGCAAGGTC GAATTGCGCA CGCTGCAGGC CACGTCGACC
TACGGCCAGT ACTGGGTGGT CGAAGGCGGC CTGAATGTGG GCGATCGCGT GATCGTGAAT
GGCGTCGACA AGGTCAAACC GGGCGCGCAG GCGAAGGGCG TGCCGGCCCA ACTGCCGCCG
CCGGCCGCAG CATCGGACGC GAGCGCGGCG GCTGCGCCGG GCGCGCCCGC CGCAAGCGGC
GCGCAGGCAG CCAGCGGCGC GGCCGCGGCC TCCGCTGCAT CGGGCGCGTA A
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| Protein sequence | MRVERVPFRL LTAATAAVML AACGQKQSAP PPQTPEVGVV TVQPQAVPVV TELPGRTSAF
LVAQVRARVD GIVLRREFTE GTQVKAGQRL YKIDPAPYIA TLNSAKASLA KAQANLASTT
AQANRYKVLV AANAVSKQDY DNAVAAEGQA AADVAAGKAA VDTAQINLGY TDVVSPVSGQ
VGISQVTPGA YVQASQATLM STVQQLDPVY VDVTQSSLSG LKLRRAIQAG RLKTNGPNAA
KVELVLEDGR VYSEKGKLQF TDVTVDQTTG SVTIRAIFAN KDHVLLPGMF VRARIEEGVN
ENALLVPQIG VTHDQKGQPT ALVLNKDGKV ELRTLQATST YGQYWVVEGG LNVGDRVIVN
GVDKVKPGAQ AKGVPAQLPP PAAASDASAA AAPGAPAASG AQAASGAAAA SAASGA
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