Gene Bphy_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0471 
Symbol 
ID6241972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp534937 
End bp536439 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content65% 
IMG OID642592235 
Productprotease Do 
Protein accessionYP_001856709 
Protein GI186475239 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0438945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA ATATGCTGAC CCGTAGCGCC GTCGCGGCGG CCGTCGTCAT CGCTTTGTCG 
GCGGGTTATG TGGCCGGCCA CCGCAATGTC CCGGCGCCCG CGGTGATCAC CCCGGCCGTG
GCCGCGATGA TGCCCGCCGA AGCCGCGGCC AAAACGGGTA TCCCCGATTT CTCGGGTCTC
GTCGAAACTT ATGGTCCCGC TGTCGTCAAC ATCAGCGCGA AGCACGTCGT CAAGCAGACG
GCGATGCGCG GCGGCAACAA CAGCGGCCAG TTGCCCATCG ACCCGAGCGA TCCGTTTTAT
CAGTTCTACC GCCACTTTTT TGGCCAGATG CCGGGTGGCC CCAATGGCGG CGGTGACGAC
GGCGGCGACC GTCCGAGCGC GAGCCTCGGC TCCGGCTTCA TTATCAGCAG CGATGGTTAT
GTGCTGACCA ATGCGCACGT CGTCGACGGT GCGAACGTCG TCACCGTGAA ACTCACCGAC
AAGCGCGAGT ACAGGGCGAA AGTGGTCGGC GCCGACAAGC AGTCGGATGT CGCAGTCCTG
AAGATCGACG CGAAGGATCT GCCGACCGTG AAGATCGGCG ATCCGCGCCA GAGCAAGGTC
GGCCAGTGGG TCGTCGCGAT CGGCTCGCCC TACGGCTTCG ACAACACGGT GACGTCGGGC
ATCATCAGCG CGAAGTCGCG CTCGCTGCCG GACGAGAACT ACACGCCGTT CATCCAGACG
GACGTGCCCG TGAATCCGGG TAACTCGGGC GGCCCGCTGT TCAATCTGCA AGGCGAAGTG
ATCGGCATCA ATTCGATGAT CTATTCGCAG ACGGGCGGCT TCCAGGGCCT TTCGTTCGCT
ATCCCGATCA ATGAGGCGAT CAAGGTCAAG GACGATCTCG TAAAGACCGG CCACGTGAGC
CGCGGCCGTC TCGGCGTCGC GGTGCAGAGT GTGAACCAGA CGCTCGCGGA TTCATTCGGC
ATGAAGAAGC CGCAAGGCGC GCTGGTCAGC TCCGTCGATC CGGGCGGCCC GGCGGCGAAA
GCAGGCCTGC AGCCCGGCGA CGTGATCCTG TCGGTGGATG GCGTCGACGT GGTGGATTCG
GCGGCGCTGC CTTCGCAGAT CGCGGGCATC AGGCCGGGCA AGCAAGTCGA CGTGCAGGTG
TGGCGCGACA AGTCGACGAA AGATATGAAA GTGACGATCG GCTCGTTGTC CGACGTGAAA
GCGGCCGCGA ACGACGACGG TGGTCCCGCG CAGATGCAAG GCCGCCTCGG CGTCGCCGTG
CGTCCGCTGA CGCCGCAGGA GAAGAGCGGC GCGTCTGTGT CGCACGGTCT GTTGGTGCAG
GACGCGAGCG GCGCGGCGGC GAGCGCGGGT ATCCAGCCCG GGGACGTGAT TCTGGCCGTC
AACGGACGCG CGGTGTCGAG CGTCGATCAG CTGAAGCAGG CGGTATCTGG AGCAGGTAAC
AGCATCGCGC TCCTGATCCA GCGCGACAAC TCGCAGATCT TCGTGCCCGT CGATCTGGGC
TGA
 
Protein sequence
MKANMLTRSA VAAAVVIALS AGYVAGHRNV PAPAVITPAV AAMMPAEAAA KTGIPDFSGL 
VETYGPAVVN ISAKHVVKQT AMRGGNNSGQ LPIDPSDPFY QFYRHFFGQM PGGPNGGGDD
GGDRPSASLG SGFIISSDGY VLTNAHVVDG ANVVTVKLTD KREYRAKVVG ADKQSDVAVL
KIDAKDLPTV KIGDPRQSKV GQWVVAIGSP YGFDNTVTSG IISAKSRSLP DENYTPFIQT
DVPVNPGNSG GPLFNLQGEV IGINSMIYSQ TGGFQGLSFA IPINEAIKVK DDLVKTGHVS
RGRLGVAVQS VNQTLADSFG MKKPQGALVS SVDPGGPAAK AGLQPGDVIL SVDGVDVVDS
AALPSQIAGI RPGKQVDVQV WRDKSTKDMK VTIGSLSDVK AAANDDGGPA QMQGRLGVAV
RPLTPQEKSG ASVSHGLLVQ DASGAAASAG IQPGDVILAV NGRAVSSVDQ LKQAVSGAGN
SIALLIQRDN SQIFVPVDLG