| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0468 |
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| Symbol | |
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| ID | 6241969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 530868 |
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| End bp | 532421 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642592232 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001856706 |
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| Protein GI | 186475236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.699386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0428834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCGCG CTGCCGCCGT GTTGTTTGCG TGCGCCGCGC TCGCTGTCGC CGCGCCCGCC
GAGGCGCGCA AGAAAGCGCA GCGACCGGCC GTCAACGTCA GCACCGTGTT GCCGCCCGCC
GTGATGGCAG GGCTGCAGCA CGCGCATGTG CCGCTGTCGT CCATTAGCGT GGTGGTCGAA
AAGGTCGGCG ACCGTACACC CGTGCTAGCA CTCAATGCCG GCAAACCGAT GATGCCCGCG
TCGACGATGA AGCTCGTCAC CACCTTTTCC GGCCTGTCGA TGCTCGGCCC GGATTACCGC
TGGAAAACGA CGGCCTACGC GCAAGGCAAT ATCGACGGCA GCGGCGTGCT GCACGGCAAT
CTTTACATTC AGGGCACGGG CGATCCGAAG CTCGTACCGG AAGAGCTGAT CGATCTGGTG
CAGAAGATCC ACAAGGCGGG CATCACGGGC ATCGACGGCG CGCTCGTGCT CGACAAGCGC
TTCTTCGATC CGTCGACCCG CGACCTGCCT GCCTTCGACG ACGACGCAAA CGCGCCGTAC
AACGTCGGTC CCGATCCGCT GCTGTACGCG TTCAAGTCGC TGTCGTTCAG GATGTCGCCG
TCCGACGACG GCAAGGTTCA GATCGACGTG CTGCCCGCGC TCGCACAACT GCAGATCGAC
AACGAATTGC ACGCGACGCG CGGCCCGTGC CGCGGCGAGC TCGTCACGCC CGCCGTCACG
CCTGCCGCAA ACGGCGTGGT CAATGCGTCG TTCATCGGCG ACTATCCGCT GCACTGTGGC
GAGCGCACGG TCAACGTGGC CGTGCTGGAT CACACGGCGT TCTTCGCGGG CGGCTTCCTC
GCGCTGTGGC AGCAGACGGG CGGCACGTTC AACGGCACGA CGCGCGAAGG TCCCGTGCCT
ATCGACGCGA AGCTCGTAGC CACGCATCAG GGGCCGATGC TGTCGGACAT CGTTCACGAC
ATCAACAAGT TCAGCAACAA CACGATGGCG CGCAATCTGT TCCTGACGAT CGGCGCCGTG
ATCAACCGGC CGCCCGCGAC GCCAGCGAAG TCGGCGGATG CAATCGAATC GTTCCTGCAC
CGCAGCGCGC TGCCAATGGA ATACCTGAGC CTCGACAATG GCTCGGGCTT GTCGCGCGAC
GAGCACATCA CCGCGCTCGC GCTCGCCGAC CTGCTGCAAA GCGCGAACGC GAGCCCCGTT
GCGCAGGTAT TCGTCGATTC GCTGCCCGTG GTCGGCGTGG ACGGCACGAT GCGCAACCGG
CTGACGTCGC AGCCGGTGAA CGGCAATGCG CACATCAAGA CGGGCACGCT GCGCGACGTG
CGCGCGATCG CAGGCTATGT CGCGTCCGCC GATGGACAAA GCTATGTCGT CGTGAGCCTG
ATCAACGATC CGCATGCGGA GGCCGCGCGC GCCGCGCACG ACGAACTGCT GGAATGGGTC
TATCAGGGTC CGTCCGTCAT GCTCGCGAGC ACGGCCAACG CGCAAGCCGC CGATGCCGCG
CAAGAGCCCG GCCGCAAAAT CCGGAAAAAC CCTCAGCGCC GCGGCGCGCA CTGA
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| Protein sequence | MSRAAAVLFA CAALAVAAPA EARKKAQRPA VNVSTVLPPA VMAGLQHAHV PLSSISVVVE
KVGDRTPVLA LNAGKPMMPA STMKLVTTFS GLSMLGPDYR WKTTAYAQGN IDGSGVLHGN
LYIQGTGDPK LVPEELIDLV QKIHKAGITG IDGALVLDKR FFDPSTRDLP AFDDDANAPY
NVGPDPLLYA FKSLSFRMSP SDDGKVQIDV LPALAQLQID NELHATRGPC RGELVTPAVT
PAANGVVNAS FIGDYPLHCG ERTVNVAVLD HTAFFAGGFL ALWQQTGGTF NGTTREGPVP
IDAKLVATHQ GPMLSDIVHD INKFSNNTMA RNLFLTIGAV INRPPATPAK SADAIESFLH
RSALPMEYLS LDNGSGLSRD EHITALALAD LLQSANASPV AQVFVDSLPV VGVDGTMRNR
LTSQPVNGNA HIKTGTLRDV RAIAGYVASA DGQSYVVVSL INDPHAEAAR AAHDELLEWV
YQGPSVMLAS TANAQAADAA QEPGRKIRKN PQRRGAH
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