| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0454 |
|---|
| Symbol | |
|---|
| ID | 6241955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 516441 |
|---|
| End bp | 517466 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642592218 |
|---|
| Product | lipopolysaccharide heptosyltransferase II |
|---|
| Protein accession | YP_001856692 |
|---|
| Protein GI | 186475222 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.788826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.709845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCG CGTTGGTTAT CGCACCGAAC TGGATCGGTG ACGCATTGAT GGCGCAGCCT
TTGTTTGCAC GCCTCGTGAA ATTGCATCCG CGCATCGCGA TCGATGCCGT CGCGCCCGCC
TGGGTGGCGC CCGTGCTCGA ACGGATGCCT GAAGTCCGCG ATGTCTACGC CACCGATCTC
GCGCACGGCA AGCTGCAGAT GCTGCGTCGC TGGCAGCTCG CGAGCGACTT GCGTGATGTC
GGCTACGACG CGGCCTACGT GCTGCCCAAT TCGCTGAAGT CCGCGCTGAT TCCGTGGATG
GCGGGCATTC CGTTGCGCAT CGGCTATACG GGCGAAAGCC GCTACGGTCT GTTGAACGTA
AGGCACACGA ATCCGCGCAA GGACGAGCGT CCGCCGATGG TCGGCCATTA TGCAGCGCTC
GCGTACGCGC CCGGCGCGAA AGTGCCCGAC GATCTCGCGC CGCCCCGGCT GGACGCCGAT
CTGAACGAAG CGGCGCGCGT GTCGACGCGC TTCAACCTCG ACACGCGCGT ACCGCTGCTG
GTCTTCTGCC CCGGCGCTGA GTACGGCCCG GCCAAACGCT GGCCGCCCGA GCACTTCGCG
GCGCTCGCGC AGATGGTCGG CCAGTCGTTC CCGTACACGA AGATCATCGC GCTCGGCTCG
CCGAAGGACG CACCCCTCGC CCAGGCCATC GCCGACCGCG CGCCGAACGT GCGCAATCTG
TGCGGCCAGA CGGCGTTGGG CGAGGCTTGC GCGCTGATCT CGCGGGCAAG CGCCGTGGTC
ACCAACGACT CCGGGCTGAT GCACGTCGCG GCCGCGTTGC GCCGGCCGCT CGTCGCCGTG
TATGGATCGA CCGATCCACG CCACACGCCG CCCTTGTCGG ACCTTGCAAA GGTACAATGG
CTGCATCTCG AGTGCAGTCC GTGCTTCCAG CGCGAATGTC CGCTGGGTCA TCTGAACTGC
CTGCGGCAAC TAAGCGCCGA ACAGGTATTC GACGACCTGC GCGGCATGTT GCTCGCGCAA
CGCTGA
|
|---|
| Protein sequence | MRRALVIAPN WIGDALMAQP LFARLVKLHP RIAIDAVAPA WVAPVLERMP EVRDVYATDL
AHGKLQMLRR WQLASDLRDV GYDAAYVLPN SLKSALIPWM AGIPLRIGYT GESRYGLLNV
RHTNPRKDER PPMVGHYAAL AYAPGAKVPD DLAPPRLDAD LNEAARVSTR FNLDTRVPLL
VFCPGAEYGP AKRWPPEHFA ALAQMVGQSF PYTKIIALGS PKDAPLAQAI ADRAPNVRNL
CGQTALGEAC ALISRASAVV TNDSGLMHVA AALRRPLVAV YGSTDPRHTP PLSDLAKVQW
LHLECSPCFQ RECPLGHLNC LRQLSAEQVF DDLRGMLLAQ R
|
|---|
| |