Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0447 |
Symbol | |
ID | 6241948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 507997 |
End bp | 509703 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642592211 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001856685 |
Protein GI | 186475215 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.499499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.735233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT CTGGTCGAAA GACCGGATCT GCGCTTTCCC ACGCGCCTGA CAACTGGTAC GCCGTAGATT GGCGTCGGGT CGAACGGAAC GTGCGAGGGA TGCAGATTCG AATTGCGAAG GCGACGCGGG AAGGTGACTG GCGCAGGGTG AAAGCCCTGC AGCGGATGCT GACCCGCACG TTGTCCGCAA AGCTGTATGC GGTGCGACGT GTTACGCAGA ACCAGGGTGC GCGAACGGCT GGAGTCGATC GCGAGCTATG GGATTCGCCT GAGAGCCGAT GGGAAGCCGT CGGCAGGTTG AAGCGGCACG GATATAAGGC TCTGCCATTA CGGAGGGTCT TTATCCCCAA GGCGAACGGG AAGGAGCGCC CTCTGGGCAT TCCGACCATG CGGGATAGGG CGATGCAAGC CCTGTATCTG CTGGCCTTGG AGCCGGTAGC AGAGTCGACG AGTGACCCGA ACTCTTATGG GTTCAGGCTT AACCGTTCGA CGGCTGATGC CATGTCTCAG ATTTTCGTTG TCATGGCCCG TCGCAGATCA GCGCGATGGG TACTTGAAGC GGACATCAAA GGATGCTTTG ACCACATCAA CCACAAGTGG TTGGAAAGCA ATGTCCCGAT GGACAGGGTG ATCCTCCGCA AATGGTTGAA AGCTGGCCTG ATTTACAAAG GGCAGTTACA GGCGACGATG GCCGGTACGC CGCAGGGAGG CATCATTTCT CCGACGCTGG CAAACGTGAC GTTGAACGGG CTGGAACGTG AACTGATTGC GCAGCTCACT GCGAAATTTG GAATCGGGAA GGCGAAGAAG CTGAAAGTGA ACGTGGTGCG ATACGCGGAC GACTTCGTCA TTACCGGCGA CTCGAAAGAG ATGCTGGAAC GCGAAGTCAG GCCTTGGGTA GAAGCCTTCC TCGAAGTGCG GGGATTGCAA CTATCGGAGG AGAAGACCCG GATCGTTCAT ATTGACGAAG GCTTTGATTT CCTTGGGTGG AACTTCCGGA AGTACTCGGG AACGCTACTC ATCAAGCCAA GCAAGAAGAA CGTGCAGACG TTCTATCGCA AGGTGGCGGA TACGATCAGC GGTCATAAGG CGGTCAAGCA GGAGGAGTTA ATTCGCCTGC TCAATCCGAT ACTACGGGGC TGGGCGCAGT ATCACTGCCC TGTAGTGGCC AAGCAGGCGT ACAGCCGCAT GGAGTCGTTG GTGTTTCAGC GGCTCTGGCG GTGGTCCAAG CGGCGGCATC CGAACAAGAA CGCCGACTGG GTGAGGCGGA AGTACTTTCA CTCCGTTGGT AATCGGCATT GGGTGTTCGC TGCTCCTGTC ATTCGCGAGG ACGGTAGTAA GGGTCTGCTT GAGTTGTACC AAATCAGCGG TACGGAAATC AGGCGCCACA AGAAGGTCAA AGGGGAATTC AATCCCTTTG ATCTCGTGTG GGAGCAATAC GGCGAGCATC TGCGGCAGGA GCGTATGTGG GATTCGATGC GCTATCGAAA GCAGTGGGCT TCGCTGTACA TGTTACAGAG TGGGCAGTGT GCACACTGTG GCTGTGCCCT GACGGACGAG ACGGGCTGGC ACGACCATCA TCTGGAGTAT CGGATGTATG GCGGTTCAGA CGCTCTATCG AACAGGGTAT TGCTTCACCC GGACTGCCAC CGGCAAGTGC ACGTTGGTAA ACTTGTCGTA GCTAAGCCGG CCCCGTTGCA GCACTAA
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Protein sequence | MKVSGRKTGS ALSHAPDNWY AVDWRRVERN VRGMQIRIAK ATREGDWRRV KALQRMLTRT LSAKLYAVRR VTQNQGARTA GVDRELWDSP ESRWEAVGRL KRHGYKALPL RRVFIPKANG KERPLGIPTM RDRAMQALYL LALEPVAEST SDPNSYGFRL NRSTADAMSQ IFVVMARRRS ARWVLEADIK GCFDHINHKW LESNVPMDRV ILRKWLKAGL IYKGQLQATM AGTPQGGIIS PTLANVTLNG LERELIAQLT AKFGIGKAKK LKVNVVRYAD DFVITGDSKE MLEREVRPWV EAFLEVRGLQ LSEEKTRIVH IDEGFDFLGW NFRKYSGTLL IKPSKKNVQT FYRKVADTIS GHKAVKQEEL IRLLNPILRG WAQYHCPVVA KQAYSRMESL VFQRLWRWSK RRHPNKNADW VRRKYFHSVG NRHWVFAAPV IREDGSKGLL ELYQISGTEI RRHKKVKGEF NPFDLVWEQY GEHLRQERMW DSMRYRKQWA SLYMLQSGQC AHCGCALTDE TGWHDHHLEY RMYGGSDALS NRVLLHPDCH RQVHVGKLVV AKPAPLQH
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