| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0443 |
|---|
| Symbol | sucC |
|---|
| ID | 6241944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 502950 |
|---|
| End bp | 504119 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642592207 |
|---|
| Product | succinyl-CoA synthetase subunit beta |
|---|
| Protein accession | YP_001856681 |
|---|
| Protein GI | 186475211 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.881223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC ACGAGTACCA GGGTAAGGAA ATCCTGCGGA AATTCGGAGT CGCGGTACCG
CGCGGCAAGC CGGTCTTCTC GGTGGATGAT GCGGTCAAGG CCGCTGAAGA GCTCGGCGGC
CCGGTGTGGG TCGTCAAGGC TCAGATCCAC GCGGGTGGCC GTGGCAAGGG TGGCGGCGTG
AAGGTTGCGA AGTCGCTGGA ACAGGTCCGC GAATACGCGA ACCAGATCCT CGGCATGCAG
CTCGTCACGC ACCAGACTGG CCCGGAAGGC CAGAAGGTGA ATCGTCTGCT GATCGAAGAA
GGCGCTGACA TCAAGAAGGA ACTGTATGTC GGTCTCGTGA TCGATCGCGT GTCGCAAAAG
GTCGTCGTGA TGGCTTCGAG CGAAGGCGGT ATGGACATCG AAGAAGTCGC CGCCAAGACG
CCGGAAGCGA TCCACAAGGT CGCCGTCGAT CCGTCGAAGG GTCTGCTGGA CGCGGAAGCC
GACGATCTGG CGAAGAAGAT CGGCGTGCCC GACGCTTCGA TCCCGCAAGC ACGCACGATC
CTGCAGGGCC TGTACAAGGC GACGTGGGAA ACGGACGCAT CGCTGGCCGA AATCAACCCG
TTGATCCTGA CGGGCGACGG CAAGGTGATC GCACTGGACG CCAAGTTCAA CTTCGATTCG
AACGCTCTGT TCCGTCATCC GGAAATCGTC GCGTACCGCG ACCTGGACGA AGAAGATCCG
GCTGAAGTCG AAGCATCGAA ATTTGACCTC GCGTACATCT CGCTCGACGG CAACATCGGC
TGTCTGGTGA ACGGCGCCGG CCTGGCGATG GCGACGATGG ACACGATCAA GCTGTTCGGC
GGCGAGCCGG CGAACTTCCT GGACGTCGGC GGCGGCGCCA CGACCGAAAA GGTCACTGAA
GCATTCAAGC TGATGCTGAA GAACCCGAAC CTGACGGCGA TTCTCGTGAA CATCTTCGGC
GGCATCATGC GTTGCGACGT GATCGCGGAA GGCGTGATCG CGGCTTCGAA GGCGGTCGAT
CTGCAAGTGC CGCTCGTCGT GCGCATGAAG GGCACGAACG AAGACCTCGG CAAGAAGATG
CTGGCTGACT CCGGCCTGCC GATCATCTCG GCGGACAGCA TGGAAGAAGC TGCGCAGAAG
GTCGTCGCGG CCGCCGCAGG CAAGGCCTGA
|
|---|
| Protein sequence | MKIHEYQGKE ILRKFGVAVP RGKPVFSVDD AVKAAEELGG PVWVVKAQIH AGGRGKGGGV
KVAKSLEQVR EYANQILGMQ LVTHQTGPEG QKVNRLLIEE GADIKKELYV GLVIDRVSQK
VVVMASSEGG MDIEEVAAKT PEAIHKVAVD PSKGLLDAEA DDLAKKIGVP DASIPQARTI
LQGLYKATWE TDASLAEINP LILTGDGKVI ALDAKFNFDS NALFRHPEIV AYRDLDEEDP
AEVEASKFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG GEPANFLDVG GGATTEKVTE
AFKLMLKNPN LTAILVNIFG GIMRCDVIAE GVIAASKAVD LQVPLVVRMK GTNEDLGKKM
LADSGLPIIS ADSMEEAAQK VVAAAAGKA
|
|---|
| |