| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0410 |
|---|
| Symbol | |
|---|
| ID | 6241912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 468892 |
|---|
| End bp | 469353 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642592174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001856649 |
|---|
| Protein GI | 186475179 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.135617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CCCCGAAACT GTCGCTGAAC CTCCAGTTTC CCGCTGGAAA AGCGTGGCCG
GAACACAAGT CGCTGTTGCC GAAGGCGACT GTCGCCGCGT GGATCAAGGC CGCGCTGTTC
GCGGATGCCG AGCTGACCGT GCGTTTCGTC GACGCCGACG AAGGCCGCAC GCTGAACCGC
ACATATCGCG GCAAGGACTA CGCGACCAAC GTGTTGACGT TCGCTTATGC GGAATCGGAG
GACGATCCCG TTACGGGCGA CCTGATCCTG TGCTGCCCTG TCGTCGAGAA AGAAGCGAAC
GAGCAGGGCA AGCCGCTCGG AGCGCATTAC GCGCATCTGC TCGTCCACGG CACGCTGCAC
GCGCAGGGCT ACGACCACGA GGACGAGGAC GAGGCTGAAG AGATGGAAGC CATCGAAACC
GAGGTGCTCG GCAAGCTCGG CTTCCCTGAC CCTTACGAAT AA
|
|---|
| Protein sequence | MSRAPKLSLN LQFPAGKAWP EHKSLLPKAT VAAWIKAALF ADAELTVRFV DADEGRTLNR
TYRGKDYATN VLTFAYAESE DDPVTGDLIL CCPVVEKEAN EQGKPLGAHY AHLLVHGTLH
AQGYDHEDED EAEEMEAIET EVLGKLGFPD PYE
|
|---|
| |